BLASTX nr result

ID: Atractylodes22_contig00024187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024187
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun...    75   6e-12
gb|ACU15006.1| unknown [Glycine max]                                   75   6e-12
ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subun...    74   9e-12
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...    72   5e-11
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...    68   7e-10

>ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max]
          Length = 455

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 152 PTVSQEEQWVLEGQVFHIYQLFCNIPPKSQAVMLELQRDNHIDYLTKGL 298
           PTVSQ EQW++E QVF IYQLF  IP  +Q +MLELQRDNH+ Y++KGL
Sbjct: 18  PTVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGL 66


>gb|ACU15006.1| unknown [Glycine max]
          Length = 224

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 152 PTVSQEEQWVLEGQVFHIYQLFCNIPPKSQAVMLELQRDNHIDYLTKGL 298
           PTVSQ EQW++E QVF IYQLF  IP  +Q +MLELQRDNH+ Y++KGL
Sbjct: 18  PTVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGL 66


>ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subunit beta-like [Glycine
           max]
          Length = 455

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 152 PTVSQEEQWVLEGQVFHIYQLFCNIPPKSQAVMLELQRDNHIDYLTKGL 298
           PTVSQ +QW++E QVF IYQLF  IP  +Q +MLELQRDNH+ YL+KGL
Sbjct: 18  PTVSQRDQWMVESQVFQIYQLFATIPGSAQNLMLELQRDNHMQYLSKGL 66


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus
           communis] gi|223543347|gb|EEF44878.1| protein
           farnesyltransferase beta subunit, putative [Ricinus
           communis]
          Length = 438

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/50 (60%), Positives = 40/50 (80%)
 Frame = +2

Query: 149 KPTVSQEEQWVLEGQVFHIYQLFCNIPPKSQAVMLELQRDNHIDYLTKGL 298
           + T SQ EQW+++ QVF IY +F NIP K+Q +MLELQRD H++YLT+GL
Sbjct: 11  RATASQHEQWIVQDQVFQIYDIFANIPHKAQTLMLELQRDKHMEYLTRGL 60


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/49 (57%), Positives = 40/49 (81%)
 Frame = +2

Query: 152 PTVSQEEQWVLEGQVFHIYQLFCNIPPKSQAVMLELQRDNHIDYLTKGL 298
           PTV+Q EQW++E QVF +Y+L  ++P  +Q+V+LELQRD HI++LT GL
Sbjct: 9   PTVTQREQWMVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGL 57


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