BLASTX nr result

ID: Atractylodes22_contig00024178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024178
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   144   7e-33
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   144   1e-32
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   140   1e-31
ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221...   139   2e-31
emb|CAJ58640.1| putative reverse transcriptase [Cucumis melo]         139   2e-31

>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  144 bits (363), Expect = 7e-33
 Identities = 62/107 (57%), Positives = 82/107 (76%)
 Frame = -1

Query: 323  LEAHLTHLQSTLELLQKHSYYANAKKCSFGQSQIHCLGHLVSQEGVGVDPEKIHSVMEWP 144
            LE HLTHL   LE+L+++  YAN KKCSF Q ++  LGH++S +GV VDPEKI ++ EWP
Sbjct: 1701 LEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWP 1760

Query: 143  TPRNVKELRGFLGLTGYYRRFVKEYGLIAKPLTDLTKKNAFQWSPEA 3
            TP N++E+RGFLGLTGYYR+FV+ YG +A PLT L KK  F W+ ++
Sbjct: 1761 TPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDDS 1807


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  144 bits (362), Expect = 1e-32
 Identities = 60/107 (56%), Positives = 83/107 (77%)
 Frame = -1

Query: 323  LEAHLTHLQSTLELLQKHSYYANAKKCSFGQSQIHCLGHLVSQEGVGVDPEKIHSVMEWP 144
            ++ HL HL++ L+LL  H +YAN KKC+FG ++I  LGH++S++GV  DPEK+ ++++WP
Sbjct: 878  MKTHLKHLETVLQLLHLHQFYANFKKCTFGSTRISYLGHIISEQGVATDPEKVEAMLQWP 937

Query: 143  TPRNVKELRGFLGLTGYYRRFVKEYGLIAKPLTDLTKKNAFQWSPEA 3
             P++V ELRGFLG TGYYRRFVK YG IA+PL D  KKN+F W+  A
Sbjct: 938  LPKSVTELRGFLGFTGYYRRFVKNYGQIARPLRDQLKKNSFDWNEAA 984


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/103 (58%), Positives = 78/103 (75%)
 Frame = -1

Query: 320 EAHLTHLQSTLELLQKHSYYANAKKCSFGQSQIHCLGHLVSQEGVGVDPEKIHSVMEWPT 141
           + H+ H++  L ++Q H   AN KKC FGQ  +  LGHL+S+EGV VDP K+ SV  WP 
Sbjct: 546 KTHMEHVEEVLRIMQTHGLVANKKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPI 605

Query: 140 PRNVKELRGFLGLTGYYRRFVKEYGLIAKPLTDLTKKNAFQWS 12
           P+NVK +RGFLGLT YYR+F+K+YG IAKPLT+LTKK+AF W+
Sbjct: 606 PKNVKGVRGFLGLTDYYRKFIKDYGKIAKPLTELTKKDAFMWN 648


>ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221655, partial [Cucumis
           sativus]
          Length = 562

 Score =  139 bits (351), Expect = 2e-31
 Identities = 62/107 (57%), Positives = 82/107 (76%)
 Frame = -1

Query: 323 LEAHLTHLQSTLELLQKHSYYANAKKCSFGQSQIHCLGHLVSQEGVGVDPEKIHSVMEWP 144
           L AHL+H++  LE+L+K+  YAN KKCSF +S++  LGH++S++GV VDPEKI ++  WP
Sbjct: 38  LAAHLSHMKIVLEVLRKNELYANKKKCSFAKSKVDHLGHIISEKGVEVDPEKIRAIKAWP 97

Query: 143 TPRNVKELRGFLGLTGYYRRFVKEYGLIAKPLTDLTKKNAFQWSPEA 3
            P NV+E+RGFLGLT YYR+FV+ YG IA PLT L K   F+WS EA
Sbjct: 98  LPTNVREVRGFLGLTSYYRKFVQHYGTIAAPLTQLLKTGGFKWSEEA 144


>emb|CAJ58640.1| putative reverse transcriptase [Cucumis melo]
          Length = 135

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/107 (59%), Positives = 79/107 (73%)
 Frame = -1

Query: 323 LEAHLTHLQSTLELLQKHSYYANAKKCSFGQSQIHCLGHLVSQEGVGVDPEKIHSVMEWP 144
           +E HL HL    +LL++H  +AN +KC F + +I  LGH VS +GV  D EKI +V+EWP
Sbjct: 5   VETHLEHLTMVFQLLRQHCLFANRQKCHFAKDRIEYLGHWVSAKGVEADQEKIKAVIEWP 64

Query: 143 TPRNVKELRGFLGLTGYYRRFVKEYGLIAKPLTDLTKKNAFQWSPEA 3
            P+N++ELRGFLGLTGYYRRFV  YG IA PLT LTKKN F+WS EA
Sbjct: 65  IPKNIRELRGFLGLTGYYRRFVANYGAIAAPLTKLTKKNNFRWSEEA 111


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