BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024146
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   236   1e-60
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho...   229   2e-58
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   223   1e-56
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   223   1e-56
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   219   1e-55

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/167 (67%), Positives = 137/167 (82%)
 Frame = -2

Query: 503 PFKLSNVVLEIGMLSSRDSFVVAWRGPDSGVDFLIDPFDSSCKFLFTKDTAFSFKGTKSH 324
           PFKLS+V +EIG L SRD F+V WRGP SGVDFL+DPFD  CKF FT+DTAFSFKGT  H
Sbjct: 129 PFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTEH 188

Query: 323 AVIKCNFKVEFLARDVHDIKEYMDYSQSYLVLVFQLASAPLIFYRTADDDIAITHPSEML 144
           AVI+C+FK+EFL RD+++IK+Y D   S LV++ QLASAP ++YRTADDDI +  P ++L
Sbjct: 189 AVIRCDFKLEFLVRDINEIKQYTD--TSCLVILLQLASAPSVWYRTADDDIEVLVPFDLL 246

Query: 143 DDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 3
           DDDDPWIRTTDFTPSGAIGRCN+YR+ I  R   K+K+AL FL+E+R
Sbjct: 247 DDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERR 293


>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1198

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/168 (64%), Positives = 137/168 (81%)
 Frame = -2

Query: 506 TPFKLSNVVLEIGMLSSRDSFVVAWRGPDSGVDFLIDPFDSSCKFLFTKDTAFSFKGTKS 327
           TPFKLS V +EIG L SRD F V WRGP +GVDFL+DPFD +C+F F+++TAFSFK T  
Sbjct: 128 TPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAE 187

Query: 326 HAVIKCNFKVEFLARDVHDIKEYMDYSQSYLVLVFQLASAPLIFYRTADDDIAITHPSEM 147
           HAVIKC+FKVEFL RD+++IK+Y +   S LVL+ QLASAP ++YRTADDDI ++ P ++
Sbjct: 188 HAVIKCDFKVEFLVRDINEIKQYTE--TSCLVLLLQLASAPRVWYRTADDDIEVSVPFDL 245

Query: 146 LDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 3
           LDDDDPWIRTTDFT SGAIGRC++YR+ I  R  PK++KA+ FLKE+R
Sbjct: 246 LDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERR 293


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  223 bits (569), Expect = 1e-56
 Identities = 106/167 (63%), Positives = 132/167 (79%)
 Frame = -2

Query: 503 PFKLSNVVLEIGMLSSRDSFVVAWRGPDSGVDFLIDPFDSSCKFLFTKDTAFSFKGTKSH 324
           PFK  +V LEIG+L SRD +   WRGP SGVDFL+DPFD +CKFLFTKDTAFSFKG   H
Sbjct: 129 PFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMPKH 188

Query: 323 AVIKCNFKVEFLARDVHDIKEYMDYSQSYLVLVFQLASAPLIFYRTADDDIAITHPSEML 144
           AVIKCNFKVEFL R+++++++  D S   L+L+ QL+S+P ++YRTADDDI  T P ++L
Sbjct: 189 AVIKCNFKVEFLVREINEVRQRRDMSS--LILLLQLSSSPFVYYRTADDDIEETVPFDLL 246

Query: 143 DDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 3
           DDDDPWIRTTDFT SGAIGRCN+YRI I  R   K+KKA+ +L+ +R
Sbjct: 247 DDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARR 293


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  223 bits (568), Expect = 1e-56
 Identities = 105/168 (62%), Positives = 135/168 (80%)
 Frame = -2

Query: 506 TPFKLSNVVLEIGMLSSRDSFVVAWRGPDSGVDFLIDPFDSSCKFLFTKDTAFSFKGTKS 327
           TPFKL +V LEIG L+S D F+V WRGP SGV+FL+DPFD +CKF F++DTAFSFKGT  
Sbjct: 128 TPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTAFSFKGTNE 187

Query: 326 HAVIKCNFKVEFLARDVHDIKEYMDYSQSYLVLVFQLASAPLIFYRTADDDIAITHPSEM 147
           HAVIKC+FKVEFL R+++++K+Y +   +  V++ QLAS+P ++YRTADDD   T P  +
Sbjct: 188 HAVIKCDFKVEFLVREINEVKQYSE--PTGFVVLLQLASSPWVWYRTADDDFEKTVPFGL 245

Query: 146 LDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 3
           LDDDD WIRTTDFT SGAIGRCNTYR+L+R R   K+KKA+ +L+E+R
Sbjct: 246 LDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDYLRERR 293


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1200

 Score =  219 bits (559), Expect = 1e-55
 Identities = 107/168 (63%), Positives = 132/168 (78%)
 Frame = -2

Query: 506 TPFKLSNVVLEIGMLSSRDSFVVAWRGPDSGVDFLIDPFDSSCKFLFTKDTAFSFKGTKS 327
           TPFKLS+V  EIG L SRD F V WRGP SGVDFL+DPFD +CKF F+++TAFS K T  
Sbjct: 128 TPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSE 187

Query: 326 HAVIKCNFKVEFLARDVHDIKEYMDYSQSYLVLVFQLASAPLIFYRTADDDIAITHPSEM 147
           HAVIKC+FKVEFL RD+++I +Y +   S LVL+ QLASAP ++YRTADDDI    P ++
Sbjct: 188 HAVIKCDFKVEFLVRDINEIIQYTE--TSCLVLLLQLASAPWVWYRTADDDIEAWVPFDL 245

Query: 146 LDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 3
           LDDDDPWIRTTDFT SGAIGRC++YR+ I  R   K++KA+ +LKE+R
Sbjct: 246 LDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERR 293