BLASTX nr result
ID: Atractylodes22_contig00024137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00024137 (520 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 100 6e-22 gb|ABA26965.1| TO22-2 [Taraxacum officinale] 101 6e-20 emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera] 71 8e-11 gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 70 1e-10 emb|CCI55364.1| PH01B035L11.9 [Phyllostachys edulis] 70 2e-10 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 100 bits (248), Expect(2) = 6e-22 Identities = 47/71 (66%), Positives = 57/71 (80%) Frame = -1 Query: 280 WILDSGASHHMSPYLSSFVYLSPGSPVSIMTANGTSMPLEGVGSIVTSHVSLPDVYYIPN 101 W+LDSGASHHMSP SSF +SP S + +MTA+GT MPL GVGS+VT H+SLP+VY IP Sbjct: 342 WVLDSGASHHMSPDSSSFTSVSPLSSIPVMTADGTPMPLAGVGSVVTLHLSLPNVYLIPK 401 Query: 100 LALNLASVSQL 68 L LNLAS+ Q+ Sbjct: 402 LKLNLASIGQI 412 Score = 28.9 bits (63), Expect(2) = 6e-22 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = -2 Query: 69 CESGLW-VFFSDFLCCVQDPRSQK 1 C+SG + V FS CCVQD +SQK Sbjct: 413 CDSGDYLVMFSGSFCCVQDLQSQK 436 >gb|ABA26965.1| TO22-2 [Taraxacum officinale] Length = 99 Score = 101 bits (252), Expect = 6e-20 Identities = 48/67 (71%), Positives = 58/67 (86%) Frame = -1 Query: 280 WILDSGASHHMSPYLSSFVYLSPGSPVSIMTANGTSMPLEGVGSIVTSHVSLPDVYYIPN 101 WILDSGASHHMSP++SSF LSP +PVS+++A+ T M +EGVGSIVT ++SL DVYYIP Sbjct: 33 WILDSGASHHMSPHMSSFSSLSPRAPVSVLSASATPMSVEGVGSIVTPYISLTDVYYIPT 92 Query: 100 LALNLAS 80 LALNLAS Sbjct: 93 LALNLAS 99 >emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera] Length = 993 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%) Frame = -1 Query: 280 WILDSGASHHMSPYLSSFVYL--SPGSPVSIMTANGTSMPLEGVGSIVTSHVSLPDVYYI 107 W+LDS SHHMS SSFV + SP S S++T + T MPL GVGSI T ++SL +VY I Sbjct: 254 WVLDSXTSHHMSLSSSSFVSMCHSPSSX-SVITXDSTPMPLAGVGSICTXYLSLFNVYCI 312 Query: 106 PNLALNLASVSQL 68 P L +NL VSQL Sbjct: 313 PKLTMNLIFVSQL 325 >gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1419 Score = 70.5 bits (171), Expect = 1e-10 Identities = 33/71 (46%), Positives = 47/71 (66%) Frame = -1 Query: 280 WILDSGASHHMSPYLSSFVYLSPGSPVSIMTANGTSMPLEGVGSIVTSHVSLPDVYYIPN 101 WILDSGAS HM+P +S S S+ TA+GT +P+ G++ T ++PDV+Y+PN Sbjct: 488 WILDSGASFHMTPDISQLQSCSLTKASSVQTADGTILPVSLQGTLQTKEYTIPDVFYVPN 547 Query: 100 LALNLASVSQL 68 L++ L SV QL Sbjct: 548 LSMKLISVGQL 558 >emb|CCI55364.1| PH01B035L11.9 [Phyllostachys edulis] Length = 697 Score = 70.1 bits (170), Expect = 2e-10 Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Frame = -1 Query: 280 WILDSGASHHMSPYLSSFVYLSP-GSPVSIMTANGTSMPLEGVGSIVTSHVSLPDVYYIP 104 WILDSGAS HM+ Y S+ +++P SPVS++TA+GTS+ + G G + S +P V Y+P Sbjct: 292 WILDSGASFHMTSYSSTLSFITPLDSPVSVLTADGTSLSVSGRGPLSNSSFHVPSVAYVP 351 Query: 103 NLALNLASVSQL 68 L + L S Q+ Sbjct: 352 RLTMQLLSAGQI 363