BLASTX nr result

ID: Atractylodes22_contig00024047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024047
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26319.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002279408.1| PREDICTED: protein argonaute 10-like [Vitis ...    66   3e-09
ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumi...    59   4e-07
ref|XP_002517060.1| eukaryotic translation initiation factor 2c,...    55   5e-06
gb|AFV15388.1| AGO10A splice variant 1, partial [Solanum lycoper...    55   6e-06

>emb|CBI26319.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = -3

Query: 311 MPTRQIKEGVEQHLVIKPKPKPKSNLQNHMNPVADVAQKPPKTPQNHENNHHQPPKN--- 141
           MP RQ+KE  EQHLVI      K++LQN MNPV    QKPPKT QN +      P+N   
Sbjct: 1   MPMRQMKESSEQHLVI------KTHLQNSMNPV----QKPPKTAQNGKGPPSHEPQNAKP 50

Query: 140 ------XXXXXXXXXRKSSDQETETGIFMRPNSRPCTVA 42
                           +   +  ++ +FMRP+SRPCTVA
Sbjct: 51  HSQTSPSSKNRGRRRGRGGRKSDQSDVFMRPSSRPCTVA 89


>ref|XP_002279408.1| PREDICTED: protein argonaute 10-like [Vitis vinifera]
          Length = 995

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = -3

Query: 311 MPTRQIKEGVEQHLVIKPKPKPKSNLQNHMNPVADVAQKPPKTPQNHENNHHQPPKN--- 141
           MP RQ+KE  EQHLVI      K++LQN MNPV    QKPPKT QN +      P+N   
Sbjct: 1   MPMRQMKESSEQHLVI------KTHLQNSMNPV----QKPPKTAQNGKGPPSHEPQNAKP 50

Query: 140 ------XXXXXXXXXRKSSDQETETGIFMRPNSRPCTVA 42
                           +   +  ++ +FMRP+SRPCTVA
Sbjct: 51  HSQTSPSSKNRGRRRGRGGRKSDQSDVFMRPSSRPCTVA 89


>ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumis sativus]
           gi|449523115|ref|XP_004168570.1| PREDICTED: protein
           argonaute 10-like [Cucumis sativus]
          Length = 984

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
 Frame = -3

Query: 311 MPTRQIKEGVEQHLVIKPKPKPKSNLQNHMNPVADVAQKPPKTPQN--------HEN--- 165
           MP RQ+KE  EQHLVI      K++LQN         QK PK+ QN        H+N   
Sbjct: 1   MPVRQMKESSEQHLVI------KTHLQN-------TVQKAPKSTQNGKGPPNLEHQNIKF 47

Query: 164 -NHHQPPKNXXXXXXXXXRKSSDQETETGIFMRPNSRPCTVAASQKPADP 18
            N   PP            + SDQ     +FMRP+SRPCTVA  +KP +P
Sbjct: 48  RNPSSPPSKNRGRRRSRGGRKSDQ---GDVFMRPSSRPCTVA--RKPDEP 92


>ref|XP_002517060.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223543695|gb|EEF45223.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 986

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = -3

Query: 311 MPTRQIKEGVEQHLVIKPKPKPKSNLQNHMNPVADVAQKPPKTPQNHEN---NHHQPPKN 141
           MP RQ+KE  EQHLV+K   +   N     + +A   + PP++ + H +   N   PP  
Sbjct: 1   MPIRQMKESSEQHLVLKTHLQNTMNQPQKHHKIAQNGKGPPQSQETHNSKPQNQTSPPTK 60

Query: 140 XXXXXXXXXRKSSDQETETGIFMRPNSRPCTV 45
                     + SDQ     +F RP+SRPCTV
Sbjct: 61  NRGRRRGRGGRKSDQ---GDVFTRPSSRPCTV 89


>gb|AFV15388.1| AGO10A splice variant 1, partial [Solanum lycopersicum]
          Length = 610

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/97 (43%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
 Frame = -3

Query: 293 KEGVEQHLVIKPKPKPKSNLQNHMNPVADVAQKPPKTPQNHENNHHQ------------P 150
           KE  EQH+VIKP      +LQN MNPV    QK PKT QN +   +Q            P
Sbjct: 1   KESSEQHIVIKP------HLQNTMNPV----QKNPKTTQNGKGPPNQEPPNNKIHIQTSP 50

Query: 149 PKNXXXXXXXXXRKSSDQETETGIFMRPNSRPCTVAA 39
           P            K SDQ  ET  FMRP+SRPCT A+
Sbjct: 51  PSRNRGRRRGRGGKKSDQG-ET--FMRPSSRPCTAAS 84


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