BLASTX nr result

ID: Atractylodes22_contig00024038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024038
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-l...   195   5e-48
gb|AFK37484.1| unknown [Lotus japonicus]                              194   9e-48
ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-l...   192   3e-47
gb|AFK38116.1| unknown [Medicago truncatula]                          189   2e-46
ref|XP_003608452.1| Polyadenylate-binding protein [Medicago trun...   189   2e-46

>ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 196

 Score =  195 bits (495), Expect = 5e-48
 Identities = 93/129 (72%), Positives = 101/129 (78%)
 Frame = +1

Query: 1   RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRSNKFGQPKGYAYXXXXXXXXXXXXXXX 180
           RSVFVGNVDYSCTPEEVQQHFQSCGTVNR+TIR++KFGQPKGYAY               
Sbjct: 68  RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLL 127

Query: 181 XXSELHGRQLKVSAKRTNIPGMKVFRARRPSPYMGYRSRIPYMAAPFFPPYGYGKVPRFR 360
             SELHGRQLKV+AKRTNIPGMK +R RR +P+MG RSR PY+A  FF PYGYGKVPRFR
Sbjct: 128 NESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR 187

Query: 361 MAMRYSPYY 387
           M  RY PYY
Sbjct: 188 MPTRYGPYY 196


>gb|AFK37484.1| unknown [Lotus japonicus]
          Length = 200

 Score =  194 bits (493), Expect = 9e-48
 Identities = 94/130 (72%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRSNKFGQPKGYAYXXXXXXXXXXXXXXX 180
           RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR++KFGQPKGYAY               
Sbjct: 71  RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALAL 130

Query: 181 XXSELHGRQLKVSAKRTNIPGMKVFRARRPSPYMGYRSRIPYMAAPF-FPPYGYGKVPRF 357
             SELHGRQLKVS KRTN+PGMK FR R P+PYMG+R R  +   PF F PYGYGKVPRF
Sbjct: 131 NESELHGRQLKVSGKRTNVPGMKQFRPRAPNPYMGFRGRALFAPPPFAFAPYGYGKVPRF 190

Query: 358 RMAMRYSPYY 387
           RM MRYSPYY
Sbjct: 191 RMGMRYSPYY 200


>ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 196

 Score =  192 bits (489), Expect = 3e-47
 Identities = 92/129 (71%), Positives = 100/129 (77%)
 Frame = +1

Query: 1   RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRSNKFGQPKGYAYXXXXXXXXXXXXXXX 180
           RSVFVGNVDYSCTPEEVQQHFQSCGTVNR+TIR++KFGQPKGYAY               
Sbjct: 68  RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLL 127

Query: 181 XXSELHGRQLKVSAKRTNIPGMKVFRARRPSPYMGYRSRIPYMAAPFFPPYGYGKVPRFR 360
             SELHGRQLKV+A RTNIPGMK +R RR +P+MG RSR PY+A  FF PYGYGKVPRFR
Sbjct: 128 NESELHGRQLKVTAMRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR 187

Query: 361 MAMRYSPYY 387
           M  RY PYY
Sbjct: 188 MPTRYGPYY 196


>gb|AFK38116.1| unknown [Medicago truncatula]
          Length = 199

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/133 (70%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRSNKFGQPKGYAYXXXXXXXXXXXXXXX 180
           RS+FVGNVDY+CTPE+VQQHFQSCGTVNRVTIR++KFGQPKGYAY               
Sbjct: 68  RSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAAQEALLL 127

Query: 181 XXSELHGRQLKVSAKRTNIPGMKVFRARRPS-PYMGYRSRIPYMAAPFF---PPYGYGKV 348
             SELHGRQLKV+AKRTN+PGMK FR RRPS PYMG+R R PY A PF     PYGYGK+
Sbjct: 128 NESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPY-APPFAYAPAPYGYGKI 186

Query: 349 PRFRMAMRYSPYY 387
           PRFRM MRYSPYY
Sbjct: 187 PRFRMGMRYSPYY 199


>ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355509507|gb|AES90649.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 199

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/133 (70%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRSNKFGQPKGYAYXXXXXXXXXXXXXXX 180
           RS+FVGNVDY+CTPE+VQQHFQSCGTVNRVTIR++KFGQPKGYAY               
Sbjct: 68  RSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLL 127

Query: 181 XXSELHGRQLKVSAKRTNIPGMKVFRARRPS-PYMGYRSRIPYMAAPFF---PPYGYGKV 348
             SELHGRQLKV+AKRTN+PGMK FR RRPS PYMG+R R PY A PF     PYGYGK+
Sbjct: 128 NESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPY-APPFAYAPAPYGYGKI 186

Query: 349 PRFRMAMRYSPYY 387
           PRFRM MRYSPYY
Sbjct: 187 PRFRMGMRYSPYY 199


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