BLASTX nr result

ID: Atractylodes22_contig00024029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024029
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-...   166   2e-39
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...   165   3e-39
ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago tru...   163   2e-38
ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-...   162   3e-38
emb|CBI14884.3| unnamed protein product [Vitis vinifera]              162   3e-38

>ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1552

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/133 (60%), Positives = 102/133 (76%), Gaps = 4/133 (3%)
 Frame = -3

Query: 390  EFPKLDIEASFMANELGMDYICTNLVFREIKKQDKERIQSALDIDEATHGNQDWTVKLGI 211
            ++PK++ EA  +A +LG+DY+  N+ +    K+D+E+IQSALD +EA  GN DW VKLGI
Sbjct: 768  DYPKIEAEAKMVAEDLGIDYMWKNIEYSHASKEDEEKIQSALDSEEAIPGNGDWAVKLGI 827

Query: 210  DIFYSARLSQSSLYRKQMPYNSVIYNAFGHCSPSTDPTKPK----PLGRQKKIIVAGKWC 43
            ++FYSA LS+S LY KQMPYNSVIY+AFG  SP++ P +PK     + RQKK IVAGKWC
Sbjct: 828  NLFYSANLSRSPLYSKQMPYNSVIYSAFGCSSPASSPVEPKVYQRRVNRQKK-IVAGKWC 886

Query: 42   GKVWMSNQAHPLL 4
            GKVWMSNQ HPLL
Sbjct: 887  GKVWMSNQVHPLL 899


>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/132 (59%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
 Frame = -3

Query: 390  EFPKLDIEASFMANELGMDYICTNLVFREIKKQDKERIQSALDIDEATHGNQDWTVKLGI 211
            ++PK++ EA  +A +LG+DY+  N+V+R    +D+ERIQSALD +EA  GN DW VKLGI
Sbjct: 784  DYPKIEAEAKMVAEDLGIDYVLKNIVYRHASTEDEERIQSALDNEEAIPGNGDWAVKLGI 843

Query: 210  DIFYSARLSQSSLYRKQMPYNSVIYNAFGHCSPSTDPTKPKPLGR---QKKIIVAGKWCG 40
            ++FYSA LS+S LY KQMPYNSVIY+AFG  SP++   +PK   R   ++K IVAGKWCG
Sbjct: 844  NLFYSANLSRSPLYSKQMPYNSVIYSAFGCSSPASSLVEPKVYQRRVNKQKKIVAGKWCG 903

Query: 39   KVWMSNQAHPLL 4
            KVWMSNQ HPLL
Sbjct: 904  KVWMSNQVHPLL 915


>ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago truncatula]
            gi|355504460|gb|AES85663.1| Lysine-specific demethylase
            5B [Medicago truncatula]
          Length = 1621

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/132 (59%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
 Frame = -3

Query: 390  EFPKLDIEASFMANELGMDYICTNLVFREIKKQDKERIQSALDIDEATHGNQDWTVKLGI 211
            ++PK++ EA  +A +LG+D    N+ +R   K+D++RIQSALD +EA+ GN DWTVKLGI
Sbjct: 843  DYPKIEAEAQLVAEDLGIDCTWKNIAYRHGTKEDEKRIQSALDSEEASLGNGDWTVKLGI 902

Query: 210  DIFYSARLSQSSLYRKQMPYNSVIYNAFGHCSPSTDPTKPKPLGR---QKKIIVAGKWCG 40
            ++FYSA LS+S LY KQMPYNSVIY AFG  SP++ P +PK   R   ++K +VAGKWCG
Sbjct: 903  NLFYSASLSRSPLYSKQMPYNSVIYYAFGRSSPASSPIEPKVYQRRADKQKKVVAGKWCG 962

Query: 39   KVWMSNQAHPLL 4
            KVWMSNQ HPLL
Sbjct: 963  KVWMSNQVHPLL 974


>ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1567

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/133 (58%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
 Frame = -3

Query: 390  EFPKLDIEASFMANELGMDYICTNLVFREIKKQDKERIQSALDIDEATHGNQDWTVKLGI 211
            ++PK++ EA  +A +LG+DY+   + +R    +D+ERIQSALD +EA  GN DW VKLGI
Sbjct: 785  DYPKIEAEAKMVAEDLGIDYMWKKIAYRHASTEDEERIQSALDNEEAIPGNGDWAVKLGI 844

Query: 210  DIFYSARLSQSSLYRKQMPYNSVIYNAFGHCSPSTDPTKPK----PLGRQKKIIVAGKWC 43
            ++FYSA LS+S LY KQMPYNSVIY +FG  SP++ P +PK     + RQKK +VAGKWC
Sbjct: 845  NLFYSANLSRSPLYSKQMPYNSVIYYSFGCSSPASSPVEPKVYQRRVNRQKK-VVAGKWC 903

Query: 42   GKVWMSNQAHPLL 4
            GKVWMSNQ HPLL
Sbjct: 904  GKVWMSNQVHPLL 916


>emb|CBI14884.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 4/133 (3%)
 Frame = -3

Query: 390 EFPKLDIEASFMANELGMDYICTNLVFREIKKQDKERIQSALDIDEATHGNQDWTVKLGI 211
           ++PK++ EA  +A +LG+DY+  + V+R+  K+D E IQSALD +E   GN DW VKLG+
Sbjct: 553 DYPKVEAEAKLVAEDLGIDYLWNDFVYRDATKEDGEMIQSALDSEECIPGNGDWAVKLGV 612

Query: 210 DIFYSARLSQSSLYRKQMPYNSVIYNAFGHCSPSTDPTKPKPLGR----QKKIIVAGKWC 43
           +++YSA LS+S LY KQMPYNSVIYN FG  S +  PT P   GR    QKKI+VAGKWC
Sbjct: 613 NLYYSANLSRSPLYIKQMPYNSVIYNVFGR-SSANSPTAPDVYGRGPGKQKKIVVAGKWC 671

Query: 42  GKVWMSNQAHPLL 4
           GKVWMSNQ HPLL
Sbjct: 672 GKVWMSNQVHPLL 684


Top