BLASTX nr result

ID: Atractylodes22_contig00024005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024005
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]      65   7e-09
dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]           62   6e-08
dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]           60   2e-07

>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
 Frame = -3

Query: 602  ETIRWHEEKSNQPYGDHGGSMMLQDTNSCEEKVVNSNEFSKNN---IDLNAYAECEVPES 432
            E+I+W  + + QP GD     +    +S E++V NS E S ++   +      +C +  S
Sbjct: 809  ESIKWDAKTAIQPVGDQSSMTVDGYQDSEEKEVANSEELSGSSTATVSSINEPKCNLLNS 868

Query: 431  SEKDLAMYKESVVDQI----------------EVDDIVSSQNSADTPPSSIQSSIVHTTM 300
            S   L+ Y +S  +++                E +D++SSQNS  +  +S   S+V T  
Sbjct: 869  SGSGLSTYCDSTANRLNMETIRGKTDCFKGDEETNDVLSSQNSVVSSENSGDFSLVQTAE 928

Query: 299  E---------EQKDRSKA---TVLGGYTSFVELLHMQGTKKVHETYSQEQANESSNKKIG 156
                      E  D +K     +L G TSFV+LL M G+ ++HE  S +  N S N+K+ 
Sbjct: 929  RTGSCSEGNSEGADHTKRPIFNILNGSTSFVQLLQMVGSARLHEVQSHQ--NMSPNEKLK 986

Query: 155  QDGLESLTYLEEQNDSISPDSNSSERTLSPKEHELPY 45
                    +  E  D+     + +   L P  +  PY
Sbjct: 987  CQNKPIPNHQRENCDNSDGPKSFTREDLMPSANYHPY 1023


>dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
          Length = 1796

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
 Frame = -3

Query: 602  ETIRWHEEKSNQPYGDHGGSMMLQDTNSCEEKVVNSNEFSKNNIDLNAYAECEV---PES 432
            +TI WH+++S+ P        +    ++ E+ VVNS E S+N+ +  +  E  +   P S
Sbjct: 892  DTIGWHDDQSSPPTLGQDFLRISSAESNGEKTVVNSIESSENSTNCTSPTENSISQQPGS 951

Query: 431  SEKDLAMYKESVV--------------DQIEVDDIVSSQNSADTPPSSIQSSIVHTTMEE 294
            S +   ++ E  +              DQI  DD++SSQNS  +  +S+   +V T    
Sbjct: 952  SRESSCVHHEPAMYGSATANAATSFLEDQIGPDDLLSSQNSVLSSQNSVNFPVVQTL--- 1008

Query: 293  QKDRSKATVLGGYTSFVELLHMQGTKKVHETYSQEQAN 180
              + ++++   G TSF++LL M GT K H    Q+  N
Sbjct: 1009 --EGTESSNFSGSTSFLKLLQMAGTSKSHGVQDQKSEN 1044


>dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]
          Length = 1662

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
 Frame = -3

Query: 599  TIRWHEEKSNQPYGDHGGSMMLQDTNSCEEK-VVNSNEFSKNNIDLNAYAECEV---PES 432
            +IRWHE+++NQ       S  + +T+S EEK  VNS+E S+N+ D    AE  V    +S
Sbjct: 977  SIRWHEDQANQS-SRCQDSWRVYNTDSNEEKTAVNSSESSENSTDCIKSAEHSVILQSDS 1035

Query: 431  SEKDLAMYKESVV----DQIEVDDIVSSQNSADTPPSSIQSSIVHTTMEEQKDRSKATVL 264
            S +   +Y ES +    D+ E++D+ SS +S     SS  S++V T+     +R+  +  
Sbjct: 1036 SREGSDLYHESTLMGFRDKKELNDLPSSPSSV---VSSENSAVVQTS-----ERTDTSSF 1087

Query: 263  GGYTSFVELLHMQGTKKVHETYSQEQANESSN 168
               TSF++LL M GT     T   E   E  N
Sbjct: 1088 CSSTSFLKLLQMAGTSGARGTTCTEYLQEGGN 1119


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