BLASTX nr result

ID: Atractylodes22_contig00023491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023491
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW63489.1| hypothetical protein ZEAMMB73_491338 [Zea mays]        127   2e-28
ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [S...   125   5e-28
gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]                         124   1e-27
dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japo...   123   2e-27
gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japo...   123   2e-27

>gb|AFW63489.1| hypothetical protein ZEAMMB73_491338 [Zea mays]
          Length = 787

 Score =  127 bits (319), Expect(2) = 2e-28
 Identities = 60/75 (80%), Positives = 65/75 (86%)
 Frame = +2

Query: 23  MD*IKPDQRNILFCAFKKPIFKEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNFVGS 202
           +D +KP QR ILFC+FK+   KE KVAQFSGYVSEHSAYHHGEQSL  TIIGMAQNFVGS
Sbjct: 12  VDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLAGTIIGMAQNFVGS 71

Query: 203 NNINLLYPSGQFGIR 247
           NNINL+YPSGQFG R
Sbjct: 72  NNINLMYPSGQFGTR 86



 Score = 23.5 bits (49), Expect(2) = 2e-28
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1  RSIPSMVDGL 30
          RSIPSMVDGL
Sbjct: 6  RSIPSMVDGL 15


>ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
           gi|241932530|gb|EES05675.1| hypothetical protein
           SORBIDRAFT_04g030880 [Sorghum bicolor]
          Length = 1452

 Score =  125 bits (315), Expect(2) = 5e-28
 Identities = 59/75 (78%), Positives = 65/75 (86%)
 Frame = +2

Query: 23  MD*IKPDQRNILFCAFKKPIFKEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNFVGS 202
           +D +KP QR ILFC+FK+   KE KVAQFSGYVSEHSAYHHGEQSL STIIGMAQNFVGS
Sbjct: 696 VDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGS 755

Query: 203 NNINLLYPSGQFGIR 247
           NNINL++P GQFG R
Sbjct: 756 NNINLMFPGGQFGTR 770



 Score = 23.5 bits (49), Expect(2) = 5e-28
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   RSIPSMVDGL 30
           RSIPSMVDGL
Sbjct: 690 RSIPSMVDGL 699


>gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
          Length = 1412

 Score =  124 bits (311), Expect(2) = 1e-27
 Identities = 59/75 (78%), Positives = 65/75 (86%)
 Frame = +2

Query: 23  MD*IKPDQRNILFCAFKKPIFKEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNFVGS 202
           +D +KP QR ILFC+FK+   KE KVAQFSGYVSEHSAYHHGEQSL STIIGMAQNFVGS
Sbjct: 697 VDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGS 756

Query: 203 NNINLLYPSGQFGIR 247
           NNINL+ P+GQFG R
Sbjct: 757 NNINLMSPNGQFGTR 771



 Score = 23.5 bits (49), Expect(2) = 1e-27
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   RSIPSMVDGL 30
           RSIPSMVDGL
Sbjct: 691 RSIPSMVDGL 700


>dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
          Length = 1525

 Score =  123 bits (309), Expect(2) = 2e-27
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +2

Query: 23  MD*IKPDQRNILFCAFKKPIFKEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNFVGS 202
           +D +KP QR ILFC+FK+ + KE+KVAQFSGYVSEHSAYHHGEQSL STI GMAQ+FVGS
Sbjct: 708 VDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGS 767

Query: 203 NNINLLYPSGQFGIR 247
           NNINLL P+GQFG R
Sbjct: 768 NNINLLQPNGQFGTR 782



 Score = 23.5 bits (49), Expect(2) = 2e-27
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   RSIPSMVDGL 30
           RSIPSMVDGL
Sbjct: 702 RSIPSMVDGL 711


>gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  123 bits (309), Expect(2) = 2e-27
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +2

Query: 23  MD*IKPDQRNILFCAFKKPIFKEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNFVGS 202
           +D +KP QR ILFC+FK+ + KE+KVAQFSGYVSEHSAYHHGEQSL STI GMAQ+FVGS
Sbjct: 670 VDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGS 729

Query: 203 NNINLLYPSGQFGIR 247
           NNINLL P+GQFG R
Sbjct: 730 NNINLLQPNGQFGTR 744



 Score = 23.5 bits (49), Expect(2) = 2e-27
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   RSIPSMVDGL 30
           RSIPSMVDGL
Sbjct: 664 RSIPSMVDGL 673


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