BLASTX nr result

ID: Atractylodes22_contig00023400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023400
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   145   5e-35
ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...   140   3e-33
ref|XP_004173508.1| PREDICTED: translation initiation factor IF-...   140   3e-33
ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [S...   139   2e-32
ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g...   139   2e-32

>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score =  145 bits (366), Expect(2) = 5e-35
 Identities = 73/85 (85%), Positives = 78/85 (91%)
 Frame = -3

Query: 286 LGAFVVSMPSGASINFLDTPGHVAFSAMRARGAAVTDIVVLVVAADDGVMPQTIEAMPHA 107
           LGAFVVSMPSGASI FLDTPGH AFSAMRARGAAVTD+VVLVVAADDGVMPQT+EAM HA
Sbjct: 243 LGAFVVSMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAMSHA 302

Query: 106 KASDVPIVVAINKCDKPASDLKESK 32
           KA+ VPIVVAINKCDKPA+D +  K
Sbjct: 303 KAAKVPIVVAINKCDKPAADPERVK 327



 Score = 27.3 bits (59), Expect(2) = 5e-35
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PERVKVQLTSEGLPL 3
           PERVKVQL SEGL L
Sbjct: 323 PERVKVQLASEGLLL 337


>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 724

 Score =  140 bits (354), Expect(2) = 3e-33
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -3

Query: 286 LGAFVVSMPSGASINFLDTPGHVAFSAMRARGAAVTDIVVLVVAADDGVMPQTIEAMPHA 107
           LGAFVV M SGASI FLDTPGH AFSAMRARGAAVTDIVVLVVAADDGVMPQT+EAM HA
Sbjct: 242 LGAFVVEMASGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMAHA 301

Query: 106 KASDVPIVVAINKCDKPASDLKESK 32
           KA++VPIV+AINKCDKPA+D +  K
Sbjct: 302 KAANVPIVLAINKCDKPAADPERVK 326



 Score = 26.2 bits (56), Expect(2) = 3e-33
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PERVKVQLTSEGLPL 3
           PERVK+QL SEGL L
Sbjct: 322 PERVKLQLASEGLLL 336


>ref|XP_004173508.1| PREDICTED: translation initiation factor IF-2-like, partial
           [Cucumis sativus]
          Length = 540

 Score =  140 bits (354), Expect(2) = 3e-33
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -3

Query: 286 LGAFVVSMPSGASINFLDTPGHVAFSAMRARGAAVTDIVVLVVAADDGVMPQTIEAMPHA 107
           LGAFVV M SGASI FLDTPGH AFSAMRARGAAVTDIVVLVVAADDGVMPQT+EAM HA
Sbjct: 58  LGAFVVEMASGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMAHA 117

Query: 106 KASDVPIVVAINKCDKPASDLKESK 32
           KA++VPIV+AINKCDKPA+D +  K
Sbjct: 118 KAANVPIVLAINKCDKPAADPERVK 142



 Score = 26.2 bits (56), Expect(2) = 3e-33
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PERVKVQLTSEGLPL 3
           PERVK+QL SEGL L
Sbjct: 138 PERVKLQLASEGLLL 152


>ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [Sorghum bicolor]
           gi|241937724|gb|EES10869.1| hypothetical protein
           SORBIDRAFT_06g017820 [Sorghum bicolor]
          Length = 685

 Score =  139 bits (350), Expect(2) = 2e-32
 Identities = 69/80 (86%), Positives = 74/80 (92%)
 Frame = -3

Query: 286 LGAFVVSMPSGASINFLDTPGHVAFSAMRARGAAVTDIVVLVVAADDGVMPQTIEAMPHA 107
           +GAFVV MPSGASI FLDTPGH AFSAMRARGAAVTDIVVLVVAADDGVMPQT+EAM HA
Sbjct: 203 IGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHA 262

Query: 106 KASDVPIVVAINKCDKPASD 47
           KA++VPIVVAINKCDK  +D
Sbjct: 263 KAANVPIVVAINKCDKSGAD 282



 Score = 25.0 bits (53), Expect(2) = 2e-32
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PERVKVQLTSEGLPL 3
           PERV++QL SEGL L
Sbjct: 283 PERVRIQLGSEGLLL 297


>ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group]
           gi|50725362|dbj|BAD34434.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|50726238|dbj|BAD33814.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa
           Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical
           protein OsJ_30008 [Oryza sativa Japonica Group]
           gi|215686824|dbj|BAG89674.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 716

 Score =  139 bits (349), Expect(2) = 2e-32
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -3

Query: 286 LGAFVVSMPSGASINFLDTPGHVAFSAMRARGAAVTDIVVLVVAADDGVMPQTIEAMPHA 107
           +GAFVV MPSGASI FLDTPGH AFSAMRARGAAVTDIVVLVVAADDGVMPQT+EAM HA
Sbjct: 234 IGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHA 293

Query: 106 KASDVPIVVAINKCDKPASD 47
           KA++VPIVVA+NKCDK  +D
Sbjct: 294 KAANVPIVVAVNKCDKSGAD 313



 Score = 25.0 bits (53), Expect(2) = 2e-32
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  PERVKVQLTSEGLPL 3
           PERV++QL SEGL L
Sbjct: 314 PERVRIQLGSEGLLL 328


Top