BLASTX nr result

ID: Atractylodes22_contig00023394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023394
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   217   7e-55
ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   213   1e-53
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   213   1e-53
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   212   3e-53
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu...   208   4e-52

>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  217 bits (553), Expect = 7e-55
 Identities = 106/112 (94%), Positives = 111/112 (99%)
 Frame = -1

Query: 336 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYAMLLEDNKYFEDAFKVYE 157
           SLR+WTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINY++LLE++KYFEDAFKVYE
Sbjct: 513 SLRIWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYSLLLEEHKYFEDAFKVYE 572

Query: 156 RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAEVVKP 1
           RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAE VKP
Sbjct: 573 RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAESVKP 624


>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/112 (92%), Positives = 110/112 (98%)
 Frame = -1

Query: 336 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYAMLLEDNKYFEDAFKVYE 157
           SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYA+LLE++KYFEDAFKVYE
Sbjct: 250 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYE 309

Query: 156 RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAEVVKP 1
           RGVKIFKYPHVKDIWVTYLSKFVKRYGK+KLERARELFEHAVE APA+ V+P
Sbjct: 310 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRP 361


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/112 (92%), Positives = 110/112 (98%)
 Frame = -1

Query: 336 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYAMLLEDNKYFEDAFKVYE 157
           SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYA+LLE++KYFEDAFKVYE
Sbjct: 516 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYE 575

Query: 156 RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAEVVKP 1
           RGVKIFKYPHVKDIWVTYLSKFVKRYGK+KLERARELFEHAVE APA+ V+P
Sbjct: 576 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRP 627


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/112 (91%), Positives = 108/112 (96%)
 Frame = -1

Query: 336 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYAMLLEDNKYFEDAFKVYE 157
           SLRLW FYVDLEE LGTLESTRAVYERILDLRIATPQIIINYA LLE++KYFEDAFKVYE
Sbjct: 511 SLRLWAFYVDLEEGLGTLESTRAVYERILDLRIATPQIIINYAWLLEEHKYFEDAFKVYE 570

Query: 156 RGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAEVVKP 1
           RGVKIFKYPHVKDIWVTYLSKFVKRYGK+KLERARELFEHA+EMAPA+ VKP
Sbjct: 571 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAIEMAPADSVKP 622


>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
           gi|223539332|gb|EEF40923.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  208 bits (529), Expect = 4e-52
 Identities = 99/111 (89%), Positives = 108/111 (97%)
 Frame = -1

Query: 333 LRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYAMLLEDNKYFEDAFKVYER 154
           LRLWTFYVDLEE LG LESTRAVYERILDL+IATPQIIIN+A+LLE++KYFEDAFKVYER
Sbjct: 512 LRLWTFYVDLEEGLGDLESTRAVYERILDLKIATPQIIINFALLLEEHKYFEDAFKVYER 571

Query: 153 GVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARELFEHAVEMAPAEVVKP 1
           GVKIFKYPHVKDIWVTYLSKFVKRYGK+KLERARELFEHA++MAPA+ VKP
Sbjct: 572 GVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAIDMAPADAVKP 622


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