BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023331
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     129   2e-28
gb|ABK26380.1| unknown [Picea sitchensis]                             127   9e-28
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   126   2e-27
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   126   2e-27
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   125   4e-27

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = +3

Query: 12  MVETLFEDIFRVDQLDPDGKKFDKVNRIEARSDQFDMYMLLDVNTEIYPMHVGEKFMMVL 191
           MVE LFEDIF + ++DPDGKKFDKV+RIEARS+QFDMYM LDVNTEIYP+HVG+KF MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 192 ASTLNLDGTPDSGFFTPG 245
           A TL+LDGTPDSG++  G
Sbjct: 61  APTLSLDGTPDSGYYMQG 78


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = +3

Query: 12  MVETLFEDIFRVDQLDPDGKKFDKVNRIEARSDQFDMYMLLDVNTEIYPMHVGEKFMMVL 191
           MVE LFEDIF V ++DPDGKKFDKV+RIEARS+QFDMYMLLDVN ++YP+ VGEKF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 192 ASTLNLDGTPDSGFFTPGG 248
           A TLNLDGTPD+G+F  GG
Sbjct: 61  APTLNLDGTPDNGYFIQGG 79


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = +3

Query: 9   RMVETLFEDIFRVDQLDPDGKKFDKVNRIEARSDQFDMYMLLDVNTEIYPMHVGEKFMMV 188
           +MVE LFEDIF V +LDPDGKKFD+V+RIEARS+QFDMYM LDV TE+YPM  G++F MV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 189 LASTLNLDGTPDSGFFTPGG 248
           LA TLNLDGTPD+GF+T  G
Sbjct: 310 LAPTLNLDGTPDTGFYTQAG 329


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = +3

Query: 9   RMVETLFEDIFRVDQLDPDGKKFDKVNRIEARSDQFDMYMLLDVNTEIYPMHVGEKFMMV 188
           +MVE LFEDIF V +LDPDGKKFD+V+RIEARS+QFDMYM LDV TE+YPM  G++F MV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 189 LASTLNLDGTPDSGFFTPGG 248
           LA TLNLDGTPD+GF+T  G
Sbjct: 105 LAPTLNLDGTPDTGFYTQAG 124


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = +3

Query: 12  MVETLFEDIFRVDQLDPDGKKFDKVNRIEARSDQFDMYMLLDVNTEIYPMHVGEKFMMVL 191
           M E LFEDIF V +LDPDGKKFD+V+RIEARSDQFDMYM LDV T++YPMH G++F MVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 192 ASTLNLDGTPDSGFFTPGG 248
             TLNLDGTPDS FFT  G
Sbjct: 61  VPTLNLDGTPDSAFFTQAG 79