BLASTX nr result

ID: Atractylodes22_contig00023328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023328
         (1835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus ...   468   e-129
ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like ...   452   e-124
ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thalia...   439   e-120
ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata sub...   433   e-119
ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110

>ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223536132|gb|EEF37787.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  468 bits (1203), Expect = e-129
 Identities = 228/382 (59%), Positives = 290/382 (75%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1250 GPSFIMHLPDDCLCFIFEKCDSSTDRESFGLTCHRLLHIQNSSRRSLEFGCSFSRLNHL- 1074
            GP+ IMHL DDCL  IF+  D ++DRESFGLTC RLL IQN +RRSL+F CSF+  N   
Sbjct: 8    GPTSIMHLSDDCLSIIFQWLDCNSDRESFGLTCRRLLDIQNINRRSLQFQCSFTIFNLTS 67

Query: 1073 LSETSIDIDSFFLDKLIRRFRQLESLSLCGCVNLLDSGLTQLQNHGSKLHSLYLDCCFKV 894
            L + S+ I+SF + +L+ RF+ L  LSL GC +L DS L  LQ +GS+LHSL+LDCCF +
Sbjct: 68   LPQRSLFINSFHIHRLLTRFQHLHFLSLSGCTDLPDSALIPLQFYGSRLHSLHLDCCFGL 127

Query: 893  TDMGLSSVAVGCPALSLISLYRCSISDNGLELLAKSCSSLKDLNLEWCSLITDRGIFAIT 714
            TD GLS +  GCP L++ISLYRC+I+D GLE LA  CS+LK +NL +C L++D G+ +I+
Sbjct: 128  TDNGLSLITSGCPYLTVISLYRCNITDIGLETLANGCSALKQINLSYCPLVSDCGLRSIS 187

Query: 713  NNCRQVKAMKISHCEKIKGVGFEGCSQTLVCLEADSCKLEPEGVMGIISGGGLEYLNVSS 534
              C Q++A+KIS C +I GVGF GCS TL  ++A+SC L+P+GVMGI+SGGGLEYLNVS 
Sbjct: 188  QACCQLQAVKISCCREISGVGFTGCSPTLAYIDAESCNLDPKGVMGIVSGGGLEYLNVSG 247

Query: 533  LSWCIQGDGLRALGSGFATNLRILNFRLCRSISDETIMEISKGCPLLQEWNLSLCTEIGI 354
            +SW I+GDGL A+GSGFA  L+ILN R+CR++ DE+   I+KGCPLLQEWNL+LC  + I
Sbjct: 248  ISWSIKGDGLAAIGSGFAARLKILNLRMCRTVGDESATAIAKGCPLLQEWNLALCHGVQI 307

Query: 353  PGWESIGMYCQNLEKLHVNGCRSLCDRGLLALRNGCKRLSIIYITRCRQVSSLAITLFKI 174
             GWESIG  C  LEKLHVN CR+LCDRGL ALR GCK LS++Y+ +  +VSS AI LFK+
Sbjct: 308  SGWESIGFGCNRLEKLHVNRCRNLCDRGLQALREGCKMLSVLYLNKSCRVSSNAIELFKL 367

Query: 173  ARWDVEIKPEEVMCIMPNHFFR 108
             R +VEI+ EEVMCI P   FR
Sbjct: 368  YRGNVEIREEEVMCIGPARTFR 389


>ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like [Glycine max]
          Length = 388

 Score =  452 bits (1163), Expect = e-124
 Identities = 224/379 (59%), Positives = 287/379 (75%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1238 IMHLPDDCLCFIFEKCDSSTDRESFGLTCHRLLHIQNSSRRSLEFGCSFSRLNHLLSETS 1059
            IMHLPDDCL  IF   DS  DR+SFGLTC R LH+Q+ +R+SL+F CS + L  L S T 
Sbjct: 12   IMHLPDDCLVIIFHGLDSRIDRDSFGLTCRRWLHVQDFNRQSLQFECSSTALRPLSSSTK 71

Query: 1058 -IDIDSFFLDKLIRRFRQLESLSLCGCVNLLDSGLTQLQNHGSKLHSLYLDCCFKVTDMG 882
              DI +F L +L+RRF+ L+SLSL  C  L DSGLT+L ++GS L  L LDCC KVTD G
Sbjct: 72   GFDIHTFHLHRLLRRFQHLKSLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCLKVTDYG 131

Query: 881  LSSVAVGCPALSLISLYRC-SISDNGLELLAKSCSSLKDLNLEWCSLITDRGIFAITNNC 705
            LS VA GCP+L  ISLYRC  I+D GL+ LA +C S+K +NL +CS I+D G+ AIT+ C
Sbjct: 132  LSLVASGCPSLMSISLYRCPGITDKGLDTLASACLSMKYVNLSYCSQISDNGLKAITHWC 191

Query: 704  RQVKAMKISHCEKIKGVGFEGCSQTLVCLEADSCKLEPEGVMGIISGGGLEYLNVSSLSW 525
            RQ++A+ ISHCE + GVGFEGCS+TL  +EA+SCKL+ EGVMGI+SGGG+EYL+VS LSW
Sbjct: 192  RQLQAINISHCEGLSGVGFEGCSKTLAYVEAESCKLKQEGVMGIVSGGGIEYLDVSCLSW 251

Query: 524  CIQGDGLRALGSGFATNLRILNFRLCRSISDETIMEISKGCPLLQEWNLSLCTEIGIPGW 345
             + GD L   G GFA+ L+ILNFRLCR++SD +I+ I+KGCPLL+EWNL+LC E+  PGW
Sbjct: 252  SVLGDPLP--GIGFASCLKILNFRLCRTVSDTSIVAIAKGCPLLEEWNLALCHEVREPGW 309

Query: 344  ESIGMYCQNLEKLHVNGCRSLCDRGLLALRNGCKRLSIIYITRCRQVSSLAITLFKIARW 165
             ++G+YC+NL++LHVN CR+LCD GL ALR GCK LSI+Y+  C +++S+A+ LFK  R 
Sbjct: 310  RTVGLYCRNLKRLHVNRCRNLCDNGLQALREGCKNLSILYLNGCVRLTSVALELFKCQRA 369

Query: 164  DVEIKPEEVMCIMPNHFFR 108
            +V IK  E+MCI P   FR
Sbjct: 370  NVCIKDIEIMCIKPYWEFR 388


>ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
            gi|30680350|ref|NP_850534.1| F-box/LRR-repeat protein 12
            [Arabidopsis thaliana]
            gi|75207381|sp|Q9SRR1.1|FBL12_ARATH RecName:
            Full=F-box/LRR-repeat protein 12
            gi|6041850|gb|AAF02159.1|AC009853_19 unknown protein
            [Arabidopsis thaliana] gi|26452863|dbj|BAC43510.1|
            unknown protein [Arabidopsis thaliana]
            gi|30793809|gb|AAP40357.1| putative F-box protein family,
            AtFBL12 [Arabidopsis thaliana]
            gi|332641038|gb|AEE74559.1| F-box/LRR-repeat protein 12
            [Arabidopsis thaliana] gi|332641039|gb|AEE74560.1|
            F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
          Length = 395

 Score =  439 bits (1128), Expect = e-120
 Identities = 212/386 (54%), Positives = 292/386 (75%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1274 EMEAGDNIGPSFIMHLPDDCLCFIFEKCDSSTDRESFGLTCHRLLHIQNSSRRSLEFGCS 1095
            ++   DN   + I+HLPDDCL FIF++ DS  D +SFGLTCHR L+IQN SRRSL+F CS
Sbjct: 3    DVSESDNNVETSIIHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCS 62

Query: 1094 FSRLN-HLLSETSIDIDSFFLDKLIRRFRQLESLSLCGCVNLLDSGLTQLQNHGSKLHSL 918
            FS LN   LS+T+ D+ S  L +L+ RF+ LE LSL GC  L DS L  L+  G++LH+L
Sbjct: 63   FSVLNPSSLSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTL 122

Query: 917  YLDCCFKVTDMGLSSVAVGCPALSLISLYRCSISDNGLELLAKSCSSLKDLNLEWCSLIT 738
            YLDCCF ++D G+S++A  CP LS++SLYRC+ISD GLE LA++  SLK +NL +C L++
Sbjct: 123  YLDCCFGISDDGISTIASFCPNLSVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVS 182

Query: 737  DRGIFAITNNCRQVKAMKISHCEKIKGVGFEGCSQTLVCLEADSCKLEPEGVMGIISGGG 558
            D GI A++  C Q++++KIS+C+ I GVGF GCS TL  ++ADSC+LEP+G+ GIISGGG
Sbjct: 183  DFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGG 242

Query: 557  LEYLNVSSLSWCIQGDGLRALGSGFATNLRILNFRLCRSISDETIMEISKGCPLLQEWNL 378
            +E+LN+S +S  I+ DGL  +GSG A+ LRILN R+CR++ DE+I  I+KGCPLLQEWNL
Sbjct: 243  IEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNL 302

Query: 377  SLCTEIGIPGWESIGMYCQNLEKLHVNGCRSLCDRGLLALRNGCKRLSIIYITRCRQVSS 198
            +LC E+ I GWE++G +C+NL+KLHVN CR+LCD+GLLALR GC  L I+Y+    +++ 
Sbjct: 303  ALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTP 362

Query: 197  LAITLFKIARWDVEIKPEEVMCIMPN 120
             AI +F++ R D+ ++ EE+M I P+
Sbjct: 363  TAIEMFRLHRADITLRTEEMMVIGPD 388


>ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328375|gb|EFH58794.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  433 bits (1114), Expect = e-119
 Identities = 206/386 (53%), Positives = 294/386 (76%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1274 EMEAGDNIGPSFIMHLPDDCLCFIFEKCDSSTDRESFGLTCHRLLHIQNSSRRSLEFGCS 1095
            ++   DN+  S I+HLPDDCL FIF++ D+  D +SFGLTCHR L+IQN SRRSL+F CS
Sbjct: 3    DVSESDNVETS-IIHLPDDCLSFIFQRLDNVADHDSFGLTCHRWLNIQNISRRSLQFQCS 61

Query: 1094 FSRLNHL-LSETSIDIDSFFLDKLIRRFRQLESLSLCGCVNLLDSGLTQLQNHGSKLHSL 918
            F+ LN   LS+T+ D++S+ L +L+ RF+ LE LSL GC  L DS L  L+  G++LHSL
Sbjct: 62   FTVLNPASLSQTNPDVNSYHLHRLLTRFQWLEHLSLSGCTVLNDSSLASLRYPGARLHSL 121

Query: 917  YLDCCFKVTDMGLSSVAVGCPALSLISLYRCSISDNGLELLAKSCSSLKDLNLEWCSLIT 738
            YLDCCF ++D G+S++A  CP L ++SLYRC+ISD GLE LA++  SLK +NL +C L++
Sbjct: 122  YLDCCFGISDDGISTIASFCPNLRVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVS 181

Query: 737  DRGIFAITNNCRQVKAMKISHCEKIKGVGFEGCSQTLVCLEADSCKLEPEGVMGIISGGG 558
            D GI A++  C Q++++K+S+C+ I GVGF GCS TL  ++A+SC+LEP+G+MGIISGGG
Sbjct: 182  DLGIKALSQACLQLESVKVSNCKSITGVGFNGCSPTLGYVDAESCQLEPKGIMGIISGGG 241

Query: 557  LEYLNVSSLSWCIQGDGLRALGSGFATNLRILNFRLCRSISDETIMEISKGCPLLQEWNL 378
            +E+LN+S +S  I+ DGL  +GSG A+ LR+LN R+CR++ D +I  I+KGCPLLQEWNL
Sbjct: 242  IEFLNISGVSCYIRKDGLVPIGSGIASKLRMLNLRMCRTVGDASIEAIAKGCPLLQEWNL 301

Query: 377  SLCTEIGIPGWESIGMYCQNLEKLHVNGCRSLCDRGLLALRNGCKRLSIIYITRCRQVSS 198
            +LC E+ + GW+++G +C+NL+KLHVN CR+LCD+GLLALR GC  L I+Y+    +++ 
Sbjct: 302  ALCHEVKVSGWKAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTP 361

Query: 197  LAITLFKIARWDVEIKPEEVMCIMPN 120
             AI +F++ R D+ ++ EE+M I P+
Sbjct: 362  TAIEMFRLHRADITLRTEEMMVIGPD 387


>ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|222866786|gb|EEF03917.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  404 bits (1038), Expect = e-110
 Identities = 198/353 (56%), Positives = 261/353 (73%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1172 ESFGLTCHRLLHIQNSSRRSLEFGCSFSRLN-HLLSETSIDIDSFFLDKLIRRFRQLESL 996
            ESFGLTCHR L+IQN+ RRSL+F  S +  N   LS+  + + ++ L +L+ RF+ L  L
Sbjct: 22   ESFGLTCHRWLNIQNTHRRSLQFHSSLALPNVSSLSQRGLVVSAYHLHRLLTRFQHLHYL 81

Query: 995  SLCGCVNLLDSGLTQLQNHGSKLHSLYLDCCFKVTDMGLSSVAVGCPALSLISLYRCSIS 816
            SL GC  L DS LT LQ++ SKL  L LDCCF +TD GLS VA GC +L  ISLYRC+I+
Sbjct: 82   SLSGCSELPDSCLTFLQSYPSKLLHLNLDCCFGITDNGLSLVAAGCSSLEAISLYRCNIT 141

Query: 815  DNGLELLAKSCSSLKDLNLEWCSLITDRGIFAITNNCRQVKAMKISHCEKIKGVGFEGCS 636
            D GLE LA  CS+LK +NL +CSL++D G+ A++ +C  ++A+KISHC  + G GF+GCS
Sbjct: 142  DAGLETLANGCSALKHINLSYCSLVSDGGLRALSQSCCHLEAVKISHCSGVNGTGFKGCS 201

Query: 635  QTLVCLEADSCKLEPEGVMGIISGGGLEYLNVSSLSWCIQGDGLRALGSGFATNLRILNF 456
             TL  ++ADSC L+PEG+MGI+SGGGLEYLNVS ++W   GD L  +G+GFAT L+ILN 
Sbjct: 202  PTLTHIDADSCNLDPEGIMGIVSGGGLEYLNVSRVNWWRSGDTLAVIGAGFATRLKILNL 261

Query: 455  RLCRSISDETIMEISKGCPLLQEWNLSLCTEIGIPGWESIGMYCQNLEKLHVNGCRSLCD 276
             LCR++ DE+I  I++GCPLLQEWN++LC  + I GW+SIG+ C  LEKLHVN CR+LCD
Sbjct: 262  WLCRTVGDESIAAIARGCPLLQEWNVALCHGVRIAGWQSIGINCNKLEKLHVNRCRNLCD 321

Query: 275  RGLLALRNGCKRLSIIYITRCRQVSSLAITLFKIARWDVEIKPEEVMCIMPNH 117
             GL ALR GCKRL ++YI R  ++S+ AI LFK+ R +VEI  EE+M I P++
Sbjct: 322  LGLQALREGCKRLLVLYIGRPWKLSATAIELFKLCRGNVEISKEEIMHIGPSN 374


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