BLASTX nr result

ID: Atractylodes22_contig00023324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023324
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   197   6e-49
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   197   6e-49
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   197   1e-48
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   197   1e-48
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   196   1e-48

>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  197 bits (502), Expect = 6e-49
 Identities = 107/157 (68%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
 Frame = -3

Query: 447 FESFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDK 268
           FE FRGILHEGEIDKRVQFLIEGLFA+RKAKF+G+PAVRPELDLVE EDQLTHE+ L ++
Sbjct: 408 FERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEE 467

Query: 267 IDPEIGLDSFKLDPNFIENEERYENLKKLILG--------XXXXXXXXXXXXXXXXXXXX 112
           IDPEI LD FK DPNF+ENE+RYE+LKK ILG                            
Sbjct: 468 IDPEITLDIFKSDPNFLENEKRYEDLKKXILGEESEDEEDRSDAGSDESEDEDEEDESEE 527

Query: 111 XXXEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 1
              EQM+I DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 528 EDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAG 564


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  197 bits (502), Expect = 6e-49
 Identities = 107/155 (69%), Positives = 117/155 (75%), Gaps = 6/155 (3%)
 Frame = -3

Query: 447 FESFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDK 268
           FE FRGILHEGEIDKRVQFLIEGLFA+RKAKFQG+PAVRPELDLVE EDQ+THEV L ++
Sbjct: 487 FERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEE 546

Query: 267 IDPEIGLDSFKLDPNFIENEERYENLKKLILG------XXXXXXXXXXXXXXXXXXXXXX 106
           IDPEI LD FK DPNF+ENE+RYE LKK +LG                            
Sbjct: 547 IDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDSESDDDDDEDDESDEEE 606

Query: 105 XEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 1
            EQM+I+DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 607 EEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAG 641


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  197 bits (500), Expect = 1e-48
 Identities = 107/157 (68%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
 Frame = -3

Query: 447 FESFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDK 268
           FE FRGILHEGEIDKRVQFLIEGLFA+RKAKF+G+PAVRPELDLVE EDQLTHE+ L ++
Sbjct: 408 FERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEE 467

Query: 267 IDPEIGLDSFKLDPNFIENEERYENLKKLILG--------XXXXXXXXXXXXXXXXXXXX 112
           IDPEI LD FK DPNF+ENE+RYE+LKK ILG                            
Sbjct: 468 IDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDEEDESEE 527

Query: 111 XXXEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 1
              EQM+I DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 528 EDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAG 564


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  197 bits (500), Expect = 1e-48
 Identities = 106/154 (68%), Positives = 117/154 (75%), Gaps = 5/154 (3%)
 Frame = -3

Query: 447 FESFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDK 268
           FE FRGILHEGEIDKRVQFLIEGLFA+RKAKFQG+PAVRPELDLVE EDQ+THEV L ++
Sbjct: 471 FERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEE 530

Query: 267 IDPEIGLDSFKLDPNFIENEERYENLKKLILG-----XXXXXXXXXXXXXXXXXXXXXXX 103
           IDPEI LD FK DPNF+ENE+RYE LKK +LG                            
Sbjct: 531 IDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDEDDDSDEEDE 590

Query: 102 EQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 1
           E+M+I+DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 591 EEMQIKDETETNLVNLRRTIYLTIMSSVDFEEAG 624


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  196 bits (499), Expect = 1e-48
 Identities = 106/161 (65%), Positives = 116/161 (72%), Gaps = 12/161 (7%)
 Frame = -3

Query: 447 FESFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDK 268
           FE FRGILHEGEIDKRVQFLIEGLFA+RKAKFQGHPAVRPELDLVE EDQLTHE+ L +K
Sbjct: 391 FERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEK 450

Query: 267 IDPEIGLDSFKLDPNFIENEERYENLKKLIL------------GXXXXXXXXXXXXXXXX 124
           IDPEI LD FK DP F+E+E+RYE LKK IL            G                
Sbjct: 451 IDPEITLDIFKPDPQFLESEKRYEELKKTILGEESEDEAGSDAGSDDEDEDEDDDEDDDE 510

Query: 123 XXXXXXXEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 1
                  +QM+I+DETETNLVNLRRTIYLTIMSS+DFEEAG
Sbjct: 511 DDDEEDEQQMKIKDETETNLVNLRRTIYLTIMSSIDFEEAG 551


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