BLASTX nr result

ID: Atractylodes22_contig00023319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023319
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   109   2e-27
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   102   3e-26
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   104   7e-21
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    87   1e-18
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    83   2e-18

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  109 bits (272), Expect(2) = 2e-27
 Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
 Frame = +2

Query: 71  VGHRCS*RELSVLLAQEGNDDDALDLEAGYDRAP---EVISSEISLYSMIGFTNPKTMKM 241
           VGH+C  +ELSVL  ++  +D+     +G +  P   E I  E+SL S+IG +NPKTMK+
Sbjct: 426 VGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSNPKTMKL 485

Query: 242 LGKIQGEVVVLMVDPGATHNFLSSSTVDKLAIPVSPTKGFGVALGNGETVNG 397
            G I    VV+M+DPGATHNFLS   +DKL IPV+ ++ FGV+LG+G+ V G
Sbjct: 486 SGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRG 537



 Score = 37.7 bits (86), Expect(2) = 2e-27
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 3   LSDRELQHKREKGLCFRCDDK 65
           L+++ELQ KR KGLCF+CD+K
Sbjct: 403 LTEKELQEKRAKGLCFKCDEK 423


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  102 bits (255), Expect(2) = 3e-26
 Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
 Frame = +2

Query: 68  SVGHRCS*RELSVLLAQEGNDDDALDLEAGY------DRAPEVISSEISLYSMIGFTNPK 229
           ++GHRC  +ELS+LL  E  +++   L          D   E+ S EISL S++G ++PK
Sbjct: 359 AIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSPEISLNSVMGISSPK 418

Query: 230 TMKMLGKIQGEVVVLMVDPGATHNFLSSSTVDKLAIPVSPTKGFGVALGNGETVNG 397
           T+KM G I G+ V++MVDPGATHNF+S  TV +L IP+S ++ FGV+LG G   +G
Sbjct: 419 TLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTGAEAHG 474



 Score = 40.8 bits (94), Expect(2) = 3e-26
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 3   LSDRELQHKREKGLCFRCDDK 65
           LS++ELQ+KRE GLCFRCD+K
Sbjct: 337 LSEKELQYKREHGLCFRCDEK 357


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  104 bits (260), Expect = 7e-21
 Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 13/135 (9%)
 Frame = +2

Query: 32  RERPL-FSL**QMSVGHRCS*RELSVLLAQEGNDDDALDLEAG-YDRAPE---------- 175
           RER L F    + SVGHRC  +ELSVLL+ + +++    +E G  + AP+          
Sbjct: 303 RERGLCFRCDDKWSVGHRCK-KELSVLLSCKEDEE----IEYGELENAPQPEIPNTHIAE 357

Query: 176 -VISSEISLYSMIGFTNPKTMKMLGKIQGEVVVLMVDPGATHNFLSSSTVDKLAIPVSPT 352
             ++ EISL S++GF+NPKT+K+ G I GE V++M+DPGATHNF+S  TV++L IPVS  
Sbjct: 358 TFVNPEISLNSVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHA 417

Query: 353 KGFGVALGNGETVNG 397
           KGF V+LG G+ V G
Sbjct: 418 KGFEVSLGTGQEVRG 432


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 86.7 bits (213), Expect(2) = 1e-18
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +2

Query: 62   QMSVGHRCS*RELSVLLAQEGNDDDALDLEAGYDRAPEVI----SSEISLYSMIGFTNPK 229
            + S GHRC  +EL VLL  E  ++D    +      P +I    + E+SL S++G T P 
Sbjct: 999  KFSPGHRCK-KELRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPG 1057

Query: 230  TMKMLGKIQGEVVVLMVDPGATHNFLSSSTVDKLAIPVSPTKGFGVALGNGETVNG 397
            TMK+ G I  + V+++VD GATHNFLS   V +L +P++ T  +GV +G G +V G
Sbjct: 1058 TMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKG 1113



 Score = 31.2 bits (69), Expect(2) = 1e-18
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +3

Query: 3    LSDRELQHKREKGLCFRCDDK 65
            L++ ELQ +REKGL F+C++K
Sbjct: 979  LTESELQARREKGLWFKCEEK 999


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 83.2 bits (204), Expect(2) = 2e-18
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
 Frame = +2

Query: 74   GHRCS*RELSVLLAQEGNDDDALDL--EAGYDRAP---------EVISSEISLYSMIGFT 220
            GHRC  RE   L      +D+  ++  EA +D            +    E+S+ S++G T
Sbjct: 1266 GHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLT 1325

Query: 221  NPKTMKMLGKIQGEVVVLMVDPGATHNFLSSSTVDKLAIPVSPTKGFGVALGNGETVNG 397
            NPKTMK+ GKI+   V++++D GATHNF+S   V +L++P   T  +GV LG+G  V G
Sbjct: 1326 NPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKG 1384



 Score = 33.9 bits (76), Expect(2) = 2e-18
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 3    LSDRELQHKREKGLCFRCDDK 65
            L D E Q ++EKGLCFRC++K
Sbjct: 1242 LPDAEFQAQKEKGLCFRCNEK 1262


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