BLASTX nr result

ID: Atractylodes22_contig00023300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023300
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    98   9e-31
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    79   2e-24
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    81   2e-23
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    78   1e-21
ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221...    79   2e-21

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 98.2 bits (243), Expect(2) = 9e-31
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = -1

Query: 159  DVCQRQKYLAASPAGLLQPLPIPERIWEDISMDFITGLPKSKGFEAIFVVVDR 1
            D CQRQKYLA+SP GLLQPLP+P+RIWED+SMDFI GLPKSKG+EA+ VVVDR
Sbjct: 908  DTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDR 960



 Score = 60.5 bits (145), Expect(2) = 9e-31
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 316 KGVLLHKGRLVLSAHLSFIPDILLEFHSSVMGGH*GFLRTYKRLAGNL 173
           +GVLL++GRLV+S+    IP +L EFHS+  GGH GF RTY+RLA N+
Sbjct: 844 QGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANV 891


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 79.3 bits (194), Expect(2) = 2e-24
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = -1

Query: 156  VCQRQKYLAASPAGLLQPLPIPERIWEDISMDFITGLPKSKGFEAIFVVVDR 1
            +CQ+ K LA +PAGLL PL +P  IW DISMDFI GLPKS GFE IFVVVDR
Sbjct: 2065 ICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDR 2116



 Score = 58.2 bits (139), Expect(2) = 2e-24
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -3

Query: 313  GVLLHKGRLVLSAHLSFIPDILLEFHSSVMGGH*GFLRTYKRLAGNL 173
            G+L +K RLVLS   + IP IL  +H SV+GGH GFLRTYKR+ G L
Sbjct: 2001 GMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGEL 2047


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 81.3 bits (199), Expect(2) = 2e-23
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = -1

Query: 156  VCQRQKYLAASPAGLLQPLPIPERIWEDISMDFITGLPKSKGFEAIFVVVDR 1
            VCQ+ K  A SPAGLLQPLPIP RIWEDISMDFI GLP+S+ F+++ VVVD+
Sbjct: 910  VCQQNKTQALSPAGLLQPLPIPSRIWEDISMDFIEGLPRSRTFDSVLVVVDQ 961



 Score = 52.8 bits (125), Expect(2) = 2e-23
 Identities = 27/48 (56%), Positives = 32/48 (66%)
 Frame = -3

Query: 316 KGVLLHKGRLVLSAHLSFIPDILLEFHSSVMGGH*GFLRTYKRLAGNL 173
           +G L +KGRLVL    S +P IL  FH  V+GGH G LRTYKR+A  L
Sbjct: 845 QGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAEL 892


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 77.8 bits (190), Expect(2) = 1e-21
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -1

Query: 156  VCQRQKYLAASPAGLLQPLPIPERIWEDISMDFITGLPKSKGFEAIFVVVDR 1
            +CQ+ K    SPAGLLQPLPIP  IWEDISMDF+ GLPKS+G++ I VVVDR
Sbjct: 1150 ICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDR 1201



 Score = 50.1 bits (118), Expect(2) = 1e-21
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -3

Query: 313  GVLLHKGRLVLSAHLSFIPDILLEFHSSVMGGH*GFLRTYKRLAG 179
            G+L + GRLV+  ++     +L E+HSS MGGH G  +TYKRLAG
Sbjct: 1086 GLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLAG 1130


>ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221655, partial [Cucumis
           sativus]
          Length = 562

 Score = 78.6 bits (192), Expect(2) = 2e-21
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = -1

Query: 156 VCQRQKYLAASPAGLLQPLPIPERIWEDISMDFITGLPKSKGFEAIFVVVDR 1
           +CQ+ K LA SPAGLL PL +P R+WEDISMDF+ GL K+ G E IFVVVDR
Sbjct: 344 ICQQNKTLALSPAGLLTPLEVPNRVWEDISMDFVEGLSKANGMEVIFVVVDR 395



 Score = 48.5 bits (114), Expect(2) = 2e-21
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
 Frame = -3

Query: 310 VLLHKGRLVLSAHLSFIPDILLEFHSSVMGGH*G---FLRTYKRLAGNL 173
           +L++KGRLV++      P IL  +H SV GGH G   FLRTYKR++G L
Sbjct: 278 MLMYKGRLVIAKASRLTPMILHTYHDSVFGGHSGFLRFLRTYKRISGEL 326


Top