BLASTX nr result

ID: Atractylodes22_contig00023291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023291
         (2091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              548   e-153
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   502   e-139
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   478   e-132
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   476   e-131
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   466   e-128

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  548 bits (1412), Expect = e-153
 Identities = 300/589 (50%), Positives = 396/589 (67%), Gaps = 5/589 (0%)
 Frame = +2

Query: 5    LWRYVLNALVEIGSFIEKSHDSEKMPSFDVIVVERMVXXXXXXXXXXXXXXKVKAVSEIG 184
            LW+  L ALV+IGSFI++ H+SEK  S++ IVVE++V              +++A+S+IG
Sbjct: 561  LWKLALKALVQIGSFIDRFHESEKALSYNYIVVEKIVSLMFLDDFGLPFQLRLEAISDIG 620

Query: 185  MINLKYMLKIVQQLNKAISTSLHKSWLDGNSKSAEHAMLLLECYTDKVLPWFQNVRNSDD 364
               L  MLKIVQ L  AI  +L + ++ GN KSA+ A+ LLECY++K+LP      + +D
Sbjct: 621  TTGLNVMLKIVQGLEDAIFANLSEVYVHGNLKSAKIAVQLLECYSNKLLPGIHGAGDFED 680

Query: 365  VPMHFALKIWDEIEDSTHFCDSLREKKLLETTMNAMKHAVASCSEDSQGMILDKAFSIIS 544
            V   FA+ IW++IE+S  F    +E +LL  TM AMK AV SCSE SQG I+ KA+S++S
Sbjct: 681  VLSRFAVNIWNQIENSMAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKIIKKAYSVLS 740

Query: 545  SSTTFRVEESMVYSYQVK-EGLQPAE----FSCRDEWFISLFDSVIIALHPKTHLKNTEG 709
            S  +F + ESM  +  V+ EGLQ  +    FSCRD+W ISLF S IIA+ P+TH+ N   
Sbjct: 741  SCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWVISLFASAIIAVRPQTHIPNIRV 800

Query: 710  ILQILMRALPNGHVPSAHALGSLFNKMPSKENRLGDMKYCSLEEAMGIIFNNYIWKSCDI 889
            +L + M  L  GHVP+A ALGS+ NK+  K N +     C+LE+A+ IIFN  +W S + 
Sbjct: 801  VLHLFMTNLLKGHVPAAQALGSMVNKLCPKSNGVEISSTCTLEDALDIIFNTSLWDSHNH 860

Query: 890  SHPIRFSGGNDDNEIGVSHLRLSNVNDGLVRVQAIVGLAWVGKGLLMRGHEKVKDVIKFF 1069
                R SG   DNE+G+++L LS  N  L++V AI GLAW+GKGLL+RGHEKVKD+   F
Sbjct: 861  GPLKRCSGIGVDNEMGLANLCLSASNCQLLQVCAIEGLAWIGKGLLLRGHEKVKDITMIF 920

Query: 1070 LDCLVSSDHLTSNGDVDSPEDCKDQELVHLMRVAADSFSIIMSDSEACLNKRLHATIRPL 1249
            L CL+S ++             +   L  + + AAD+F ++MSDSE CLNKR HA IRPL
Sbjct: 921  LRCLLSKNNQ------------EQDVLPSVAKSAADAFHVLMSDSEICLNKRFHANIRPL 968

Query: 1250 YKQRLFNMVMPILLSSVVKSDSPIRRSMLHRALAHVISNTPLSAILGEANKXXXXXXXXX 1429
            YKQR F+ V+PIL+SS+ +S     RSML+RALAH+IS+TPL A+L EA K         
Sbjct: 969  YKQRFFSSVLPILVSSMAESRLSNTRSMLYRALAHIISDTPLIAVLSEAKKIIPILLDSL 1028

Query: 1430 XXXSEDVQNRDIVYNNLLVLSGILTDKNGQEAIVENTYVIVRCLNKLVFYPHMMLVRETA 1609
               S    ++DI+YN LLVLSGIL DKNGQE +VEN +VI+ CL  LV YPHMM+VRETA
Sbjct: 1029 SILSTYNLDKDILYNLLLVLSGILMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETA 1088

Query: 1610 IQCLTAMSELPYARVYPFRTQVLQALSRALDDPKRSVRQEAVRCRQAWA 1756
            IQCL AMS LP+AR+YP RTQVL+++ +ALDDPKR+VR EAVRCRQAWA
Sbjct: 1089 IQCLVAMSRLPHARIYPMRTQVLRSVQKALDDPKRAVRHEAVRCRQAWA 1137


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  502 bits (1292), Expect = e-139
 Identities = 278/608 (45%), Positives = 385/608 (63%), Gaps = 24/608 (3%)
 Frame = +2

Query: 5    LWRYVLNALVEIGSFIEKSHDSEKMPSFDVIVVERMVXXXXXXXXXXXXXXKVKAVSEIG 184
            LW   L ALV+IGSF+   ++S+K  S+  IVV +M+              K+ A+S IG
Sbjct: 560  LWNQALKALVQIGSFVHGCNESDKEMSYVDIVVGKMILLASSPDFSMPWSLKLTAISSIG 619

Query: 185  MINLKYMLKIVQQLNKAISTSLHKSWL---------------DGNSKSAEHAMLLLECYT 319
            M   KYMLK+   L +AI  +L + ++                GN KSA+  + LLECY+
Sbjct: 620  MSGQKYMLKVFLGLEEAIRANLAEIYVCMIKKKIYVLYSCLVQGNLKSAKILLQLLECYS 679

Query: 320  DKVLPWFQNVRNSDDVPMHFALKIWDEIEDSTHFCDSLREKK-LLETTMNAMKHAVASCS 496
            D++LPW Q     ++V M F + +W++IE+   F  +   K+ LL+  M  MK AVA CS
Sbjct: 680  DELLPWIQKTEGFEEVLMQFVVNLWNQIENFNAFTVAFHGKESLLDAIMKVMKDAVAFCS 739

Query: 497  EDSQGMILDKAFSIISSSTTFRVEESMVYSYQVKEGLQPAE----FSCRDEWFISLFDSV 664
             +SQ +I+ KA+ ++SSST   ++ES+  +    E  +  +     S RDEW  SLF SV
Sbjct: 740  VESQNVIIYKAYGVLSSSTFLPLKESLSENSVQLECFRAIQQMDRLSSRDEWIHSLFASV 799

Query: 665  IIALHPKTHLKNTEGILQILMRALPNGHVPSAHALGSLFNKMPSKENRLGDMKYCSLEEA 844
            IIAL P+TH+ NT  +L + + AL  GHV +A ALGSL NK+  K N       C++EEA
Sbjct: 800  IIALRPQTHIPNTRIVLHLFITALLKGHVTTAEALGSLVNKLDQKSNDACISGDCTIEEA 859

Query: 845  MGIIFNNYIWKSCDISHPIRFSGGNDDNEIGVSHLRLSNVNDGLVRVQAIVGLAWVGKGL 1024
            M IIF+  +  S       RF    + +E+ +  L L   N   +++ AIVGLAW+GKGL
Sbjct: 860  MDIIFSINLLCSFGNGSSGRFDRTRNGDEMDLIKLCLDAPNLAWIKIPAIVGLAWIGKGL 919

Query: 1025 LMRGHEKVKDVIKFFLDCLVSSDHLTSN----GDVDSPEDCKDQELVHLMRVAADSFSII 1192
            LMRGHEKVKD+   FL+CL+S   + ++    G +++  +   Q+ V  M+ A+D+F I+
Sbjct: 920  LMRGHEKVKDITMVFLNCLLSDGEIGASPLKHGSLENNGEQDMQQSV--MKSASDAFQIL 977

Query: 1193 MSDSEACLNKRLHATIRPLYKQRLFNMVMPILLSSVVKSDSPIRRSMLHRALAHVISNTP 1372
            MSDSE CLN++ HA +RPLYKQR F+ +MPIL   + KSDS   +S+L+RA AHVIS+TP
Sbjct: 978  MSDSELCLNRKYHAIVRPLYKQRFFSSIMPILYPLITKSDSSFSKSLLYRAFAHVISDTP 1037

Query: 1373 LSAILGEANKXXXXXXXXXXXXSEDVQNRDIVYNNLLVLSGILTDKNGQEAIVENTYVIV 1552
            LS I  +A K             +DV ++DI+Y  LLVLSGILTD NG+EA++EN ++I+
Sbjct: 1038 LSVISNDAKKLVPVLLDGLTLLGKDVLDKDIMYGLLLVLSGILTDTNGKEAVIENAHIII 1097

Query: 1553 RCLNKLVFYPHMMLVRETAIQCLTAMSELPYARVYPFRTQVLQALSRALDDPKRSVRQEA 1732
            +CL +LV YPHMML+RETA+QCL AMSELP+ R+YP R QVLQA+S+ALDDPKR+VRQEA
Sbjct: 1098 KCLIELVAYPHMMLIRETAVQCLVAMSELPHTRIYPVRIQVLQAISKALDDPKRAVRQEA 1157

Query: 1733 VRCRQAWA 1756
            VRCRQAWA
Sbjct: 1158 VRCRQAWA 1165


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  478 bits (1230), Expect = e-132
 Identities = 266/588 (45%), Positives = 371/588 (63%), Gaps = 4/588 (0%)
 Frame = +2

Query: 5    LWRYVLNALVEIGSFIEKSHDSEKMPSFDVIVVERMVXXXXXXXXXXXXXXKVKAVSEIG 184
            LW   L AL  IGSF++K  +SEK  S+   VV++++              KV+A+ +IG
Sbjct: 552  LWNATLKALFHIGSFVQKFSESEKAMSYRSFVVDKIMEMLSLDDIALPFSLKVEALYDIG 611

Query: 185  MINLKYMLKIVQQLNKAISTSLHKSWLDGNSKSAEHAMLLLECYTDKVLPWFQNVRNSDD 364
            M  +K ML I+Q +  AI T+L  S +  N  S E A+ LLECY+ K+LPW      +++
Sbjct: 612  MTGMKNMLTILQAMEGAIFTNL--SEVHSNLTSHETAVQLLECYSCKLLPWILKNGGAEE 669

Query: 365  VPMHFALKIWDEIEDSTHFCDSLREKKLLETTMNAMKHAVASCSEDSQGMILDKAFSIIS 544
              + FA+ IW++  +   F     +K LL+  M AMK +V  CS +SQ + + KA+S +S
Sbjct: 670  FVVQFAVDIWNQAGNCMDFNSPFEDKGLLDAMMKAMKVSVGCCSVESQNVTIQKAYSTLS 729

Query: 545  SSTTFRVEESMVYSYQVKEGLQPAEFSCRDEWFISLFDSVIIALHPKTHLKNTEGILQIL 724
            S T F++ +  V    +  G    + S RDE  + LF SVIIAL PKTH+ N  G+L + 
Sbjct: 730  SHTKFQLND--VGRLPLTSGKY--DISPRDEGILLLFASVIIALRPKTHIPNIRGLLHLF 785

Query: 725  MRALPNGHVPSAHALGSLFNKMPSKENRLGDMKYCSLEEAMGIIFNNYIWKSCDISHPIR 904
            +  L  G VP A ALGS+ NK+ SK N        +LEEA+ IIFN  IW S +    I 
Sbjct: 786  IITLLKGVVPVAQALGSMLNKLTSKSNGAEKSDELTLEEALDIIFNTKIWFSSNNMLQI- 844

Query: 905  FSGGNDDNEIGVSHLRLSNVNDGLVRVQAIVGLAWVGKGLLMRGHEKVKDVIKFFLDCLV 1084
            ++G ++ ++I ++ L L   ND L++  AI GL+W+GKGLL+RGHEK+KD+   F +CL+
Sbjct: 845  YNGSSNGSDIVLTDLCLGITNDRLLQSNAICGLSWIGKGLLLRGHEKIKDITMIFTECLI 904

Query: 1085 SSDHLTS----NGDVDSPEDCKDQELVHLMRVAADSFSIIMSDSEACLNKRLHATIRPLY 1252
            S    TS     G +++ E  K   L    + A ++F ++MSD+E CLN++ HAT+RPLY
Sbjct: 905  SDRRKTSVPLVEGSLENTEKQKCDPLAR--KCATEAFHVLMSDAEDCLNRKFHATVRPLY 962

Query: 1253 KQRLFNMVMPILLSSVVKSDSPIRRSMLHRALAHVISNTPLSAILGEANKXXXXXXXXXX 1432
            KQR F+ +MPI L  + +SDS + RS+L RA AHV+S+TPL  IL EA K          
Sbjct: 963  KQRFFSSMMPIFLQLISRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLIPVLLDCLF 1022

Query: 1433 XXSEDVQNRDIVYNNLLVLSGILTDKNGQEAIVENTYVIVRCLNKLVFYPHMMLVRETAI 1612
              +ED+Q++DI+Y  LLVLSG+LT+KNGQEA++EN ++I+  L KLV YPH  LVRETAI
Sbjct: 1023 MLTEDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINGLIKLVDYPHKTLVRETAI 1082

Query: 1613 QCLTAMSELPYARVYPFRTQVLQALSRALDDPKRSVRQEAVRCRQAWA 1756
            QCL A+SELP+ R+YP RTQVLQA+ + LDD KRSVR EAV+CRQAWA
Sbjct: 1083 QCLVALSELPHVRIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWA 1130


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  476 bits (1224), Expect = e-131
 Identities = 262/588 (44%), Positives = 378/588 (64%), Gaps = 4/588 (0%)
 Frame = +2

Query: 5    LWRYVLNALVEIGSFIEKSHDSEKMPSFDVIVVERMVXXXXXXXXXXXXXXKVKAVSEIG 184
            LW   L AL  +GSF +K  +SEK  S+  +VVE++V              KV+A+  IG
Sbjct: 555  LWEAALKALHHVGSFFQKFCESEKAMSYRNLVVEKIVEILSLDDITLSFSLKVEALLNIG 614

Query: 185  MINLKYMLKIVQQLNKAISTSLHKSWLDGNSKSAEHAMLLLECYTDKVLPWFQNVRNSDD 364
               +K ML I+Q L +A+  +L K ++  N +S+E A+ LLECY+ ++LPW      S+D
Sbjct: 615  KTGMKNMLTILQGLGRAVFANLSKVYVHRNLRSSEIAVQLLECYSCQLLPWIHENGGSED 674

Query: 365  VPMHFALKIWDEIEDSTHFCDSLREKKLLETTMNAMKHAVASCSEDSQGMILDKAFSIIS 544
              M FA+ IW +  +          K LL+  M AM+ +V SCS +SQ +I+ KA+S++S
Sbjct: 675  FVMQFAVDIWSQAGNCMDLSTPFEGKGLLDAMMKAMRLSVGSCSVESQNLIIRKAYSVLS 734

Query: 545  SSTTFRVEESMVYSYQVKEGLQPAEF--SCRDEWFISLFDSVIIALHPKTHLKNTEGILQ 718
            S T F+++E        +  L P ++  S RDE  ISLF SV+IA+ PKT++ N   ++ 
Sbjct: 735  SHTNFQLKEVE------RLPLTPGKYDISLRDEGIISLFASVVIAVCPKTYIPNIRVLVH 788

Query: 719  ILMRALPNGHVPSAHALGSLFNKMPSKENRLGDMKYCSLEEAMGIIFNNYI-WKSCDISH 895
            + +  L  G VP A ALGS+ NK+ S  +   +    +LEEA+  IFN  I + S D+  
Sbjct: 789  LFIITLLRGVVPVAQALGSILNKLVSTSSTAENSSDLTLEEALDAIFNTKISFSSTDMLQ 848

Query: 896  PIRFSGGNDDNEIGVSHLRLSNVNDGLVRVQAIVGLAWVGKGLLMRGHEKVKDVIKFFLD 1075
              R +G ++ NE+  + + L   ND ++++ AI GL+W+GKGLL+RGHEK+KD+   F++
Sbjct: 849  --RCNGTSNGNEMVFTDICLGIANDRMLQINAICGLSWMGKGLLLRGHEKIKDITMIFME 906

Query: 1076 CLVSSDHLTSNGDVDSPEDCKDQ-ELVHLMRVAADSFSIIMSDSEACLNKRLHATIRPLY 1252
            CL+S     S    DS E+ ++Q + + +++ A D+F ++MSDSE CLN++ HATIRPLY
Sbjct: 907  CLISGTKSASPLIKDSLENTEEQIQDLLVIKCATDAFHVLMSDSEVCLNRKFHATIRPLY 966

Query: 1253 KQRLFNMVMPILLSSVVKSDSPIRRSMLHRALAHVISNTPLSAILGEANKXXXXXXXXXX 1432
            KQR F+ VMPIL   + KS S + RS L+RA AH++S+TP+ AI+ EA K          
Sbjct: 967  KQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIPVLLDCLS 1026

Query: 1433 XXSEDVQNRDIVYNNLLVLSGILTDKNGQEAIVENTYVIVRCLNKLVFYPHMMLVRETAI 1612
              +E +Q++D++Y  LLVLSGIL +KNGQEA+VEN ++I+ CL KLV YPH MLVRETAI
Sbjct: 1027 MLTE-IQDKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAI 1085

Query: 1613 QCLTAMSELPYARVYPFRTQVLQALSRALDDPKRSVRQEAVRCRQAWA 1756
            QCL A+SELP+AR+YP RTQVL+A+S+ LDD KR+VR EAV+CRQ WA
Sbjct: 1086 QCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWA 1133


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  466 bits (1198), Expect = e-128
 Identities = 266/595 (44%), Positives = 376/595 (63%), Gaps = 10/595 (1%)
 Frame = +2

Query: 2    SLWRYVLNALVEIGSFIEKSHDSEKMPSFDVIVVERMVXXXXXXXXXXXXXXKVKAVSEI 181
            SLW + L AL  IGSF++K   S +  S+  IVVE++               K++   +I
Sbjct: 552  SLWNHALKALQHIGSFVDKYPGSVESQSYMHIVVEKIALMFSPHDEVLPLMLKLEMAVDI 611

Query: 182  GMINLKYMLKIVQQLNKAISTSLHKSWLDGNSKSAEHAMLLLECYTDKVLPWFQNVRNSD 361
            G     YMLKIV  + + I  +L + ++ GNSKS E  + LL+CY+ K+LPWF    + +
Sbjct: 612  GRTGRSYMLKIVGGIEETIFYNLSEVYVYGNSKSVEIVLSLLDCYSTKILPWFDEAGDFE 671

Query: 362  DVPMHFALKIWDEIEDSTHFCDSLRE--KKLLETTMNAMKHAVASCSEDSQGMILDKAFS 535
            +V + FAL IWD+IE  + F  S+ +  + LL+ TM A+K +V SCS++SQ +I+ KAF+
Sbjct: 672  EVILRFALNIWDQIEKCSTFSTSMDKCIQVLLDATMMALKLSVRSCSKESQNIIVQKAFN 731

Query: 536  IISSSTTFRVEESMVYSYQVK-EGLQPAEF----SCRDEWFISLFDSVIIALHPKTHLKN 700
            ++ +S+   ++ ++  +  V+ EGLQ  +     + RDEW +SLF SV IAL P+ H+ +
Sbjct: 732  VLLTSSFSPLKVTLSNTIPVQMEGLQFLQQKDNPTSRDEWILSLFASVTIALRPQVHVPD 791

Query: 701  TEGILQILMRALPNGHVPSAHALGSLFNKMPSKENRLGDMKYCSLEEAMGIIFNNYIWKS 880
               I+++LM +   G VP+A ALGS+ NK+  K +++    Y SLEEA+ IIF       
Sbjct: 792  VRLIIRLLMLSTTRGCVPAAQALGSMINKLSVKSDKVEVSSYVSLEEAIDIIFKTEF--- 848

Query: 881  CDISHPIRFSGGNDDNEIGVSHLRLSNVNDGLVRVQAIVGLAWVGKGLLMRGHEKVKDVI 1060
                  +      D +E+ ++ L  S     L++V A+VGL+W+GKGLL+ GH+KV+D+ 
Sbjct: 849  ----RCLHNESTGDGSEMFLTDLCSSIEKSSLLQVHAVVGLSWIGKGLLLCGHDKVRDIT 904

Query: 1061 KFFLDCLVSSDHLTSNGDVDSPEDCKDQEL---VHLMRVAADSFSIIMSDSEACLNKRLH 1231
              FL  LVS    T    +   +  KD E      +M+ AA++F I+MSDSEACLN++ H
Sbjct: 905  MVFLQLLVSKSR-TDASPLQQFKLEKDNETSLDFAVMKGAAEAFHILMSDSEACLNRKFH 963

Query: 1232 ATIRPLYKQRLFNMVMPILLSSVVKSDSPIRRSMLHRALAHVISNTPLSAILGEANKXXX 1411
            A +RPLYKQR F+ +MPI  + V KSD+ + R ML++A AHVIS+TPL+AIL +A K   
Sbjct: 964  AIVRPLYKQRFFSTMMPIFQTLVSKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKKFIP 1023

Query: 1412 XXXXXXXXXSEDVQNRDIVYNNLLVLSGILTDKNGQEAIVENTYVIVRCLNKLVFYPHMM 1591
                     S +  N+D+VY+ LLVLSGIL DKNGQEA+ EN + IV CL  L  + HMM
Sbjct: 1024 MLLDGLLTLSVNGINKDVVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFSHMM 1083

Query: 1592 LVRETAIQCLTAMSELPYARVYPFRTQVLQALSRALDDPKRSVRQEAVRCRQAWA 1756
            LVRETAIQCL A+SELP+AR+YP R QVL  +S+ALDDPKRSVRQEAVRCRQAWA
Sbjct: 1084 LVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWA 1138


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