BLASTX nr result

ID: Atractylodes22_contig00023285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023285
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    75   4e-12
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    75   7e-12
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    73   3e-11
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    56   3e-06

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/77 (48%), Positives = 53/77 (68%)
 Frame = +1

Query: 4   GLEIQNPYEQLSTIHQGDSILDYIDDFEYLLSLVPRLPETQSLGYFIVGLRPKVKRWVRL 183
           G  ++NP+E+LSTI Q  S+ ++++ FE L S V RLPE Q LGYF+ GL+P+++R VR 
Sbjct: 129 GRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRT 188

Query: 184 HRPETRLQAMCLAKRSE 234
             P  R+Q M +AK  E
Sbjct: 189 LNPLNRMQMMRIAKDVE 205


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/77 (45%), Positives = 53/77 (68%)
 Frame = +1

Query: 4   GLEIQNPYEQLSTIHQGDSILDYIDDFEYLLSLVPRLPETQSLGYFIVGLRPKVKRWVRL 183
           G  ++NP+E+LST+ Q  S+ ++++ FE L S V RLPE Q LGYF+ GL+P+++R VR 
Sbjct: 146 GRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRT 205

Query: 184 HRPETRLQAMCLAKRSE 234
             P  R++ M +AK  E
Sbjct: 206 LNPRNRMEMMRIAKDVE 222


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +1

Query: 4    GLEIQNPYEQLSTIHQGDSILDYIDDFEYLLSLVPRLPETQSLGYFIVGLRPKVKRWVRL 183
            G  ++NP+E+LST+ Q  S+ ++++ FE L S V RLPE Q LGYF+ GL+  ++R VR 
Sbjct: 819  GRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIRRRVRT 878

Query: 184  HRPETRLQAMCLAKRSE 234
              P TR+Q M +AK  E
Sbjct: 879  LNPTTRMQMMRIAKDVE 895


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +1

Query: 4   GLEIQNPYEQLSTIHQGDSILDYIDDFEYLLSLVPRLPETQSLGYFIVGLRPKVKRWVR 180
           G+   N +EQLS + Q  +I +YI DFE L++ +P+LP  Q LGYF+ GL+ K++  VR
Sbjct: 156 GVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKIRGKVR 214


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