BLASTX nr result

ID: Atractylodes22_contig00023240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023240
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003537206.1| PREDICTED: uncharacterized protein LOC100782...    67   2e-09
ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813...    65   6e-09
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002302961.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -3

Query: 272 WLKLVPKKVNVFMWRALKGRIPVRVELDKRGV-DLQSILCPLCQEAIENVDHVLIRC*VS 96
           W  +VP KV VF W A+  +I  R  L +RG+ D+ +  CP+C    E+VDH+L+ C   
Sbjct: 346 WRGIVPPKVEVFCWMAIIKKINTRSMLVRRGILDISAAACPICLAEEESVDHILLHCHKH 405

Query: 95  LDIWSKLFRWWGV 57
             +WSK+  WWG+
Sbjct: 406 WIVWSKIINWWGL 418


>ref|XP_003537206.1| PREDICTED: uncharacterized protein LOC100782759 [Glycine max]
          Length = 1141

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = -3

Query: 272  WLKLVPKKVNVFMWRALKGRIPVRVELDKRGVDLQSILCPLCQEAIENVDHVLIRC*VSL 93
            W   +P K  +F W+ +K R+P RV L +R V LQ  +CPLC E  E   H+   C  ++
Sbjct: 1049 WSLNIPPKAAIFTWKLIKDRLPTRVNLQRRNVGLQESICPLCHEEQEEASHLFFHCTQTI 1108

Query: 92   DIWSKLFRW 66
             +W +  RW
Sbjct: 1109 VLWWETLRW 1117


>ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max]
          Length = 1227

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = -3

Query: 272 WLKLVPKKVNVFMWRALKGRIPVRVELDKRGVDLQSILCPLCQEAIENVDHVLIRC*VSL 93
           W   +P K  VF W+ L GR+P R  L +RGV++Q   CPLC +  E V H+   C   L
Sbjct: 128 WNMKIPPKHAVFTWKLLSGRLPTRANLSRRGVNIQDTACPLCGDVQEEVGHLFFNCKKIL 187

Query: 92  DIWSKLFRW 66
            +W +   W
Sbjct: 188 GLWWESMSW 196



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/69 (37%), Positives = 40/69 (57%)
 Frame = -3

Query: 272 WLKLVPKKVNVFMWRALKGRIPVRVELDKRGVDLQSILCPLCQEAIENVDHVLIRC*VSL 93
           W   +P +V VF+WR LK R+P +  L +R VD+Q   CPLC +  E V H+   C  ++
Sbjct: 406 WNLNIPPRVAVFIWRLLKDRLPTKGNLLRRHVDIQDAGCPLCGQGQEEVGHLFFNCKRTI 465

Query: 92  DIWSKLFRW 66
           ++W +   W
Sbjct: 466 NMWWESMGW 474



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/69 (39%), Positives = 35/69 (50%)
 Frame = -3

Query: 272  WLKLVPKKVNVFMWRALKGRIPVRVELDKRGVDLQSILCPLCQEAIENVDHVLIRC*VSL 93
            W   VP KV  F WR L  R+P +  L +R + L + LCPLCQ   E   H+   C   L
Sbjct: 1063 WDLKVPPKVLSFAWRLLWDRLPTKDNLSRRQIQLDNDLCPLCQTQPETASHLFFTCDKVL 1122

Query: 92   DIWSKLFRW 66
             +W + F W
Sbjct: 1123 PLWWEFFTW 1131


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 272 WLKLVPKKVNVFMWRALKGRIPVRVELDKRGV-DLQSILCPLCQEAIENVDHVLIRC*VS 96
           W  +VP KV +F W  +   +  R  L +RGV D  +  CP+C    E+VDH+++ C   
Sbjct: 413 WKGVVPPKVEIFCWMVIINILNTRGVLVRRGVLDSSNSNCPICLVEEESVDHLILLCYKH 472

Query: 95  LDIWSKLFRWWGV 57
           L IWSK+ +WWG+
Sbjct: 473 LTIWSKIIKWWGL 485


>ref|XP_002302961.1| predicted protein [Populus trichocarpa] gi|222844687|gb|EEE82234.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = -3

Query: 272 WLKLVPKKVNVFMWRALKGRIPVRVELDKRGV-DLQSILCPLCQEAIENVDHVLIRC*VS 96
           W  LVP KV VF W  +  +I  R  L KRG+ D  +  CP+C    E VDH+ I C   
Sbjct: 82  WRGLVPPKVEVFCWMTIINKINTRSMLVKRGILDTSAANCPICLVEEEMVDHLFIHCYKH 141

Query: 95  LDIWSKLFRWWGV 57
             IWSK+  W G+
Sbjct: 142 WLIWSKIINWCGL 154


Top