BLASTX nr result

ID: Atractylodes22_contig00023229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023229
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synt...    64   1e-08
gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camell...    62   4e-08
ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|A...    62   4e-08
gb|AAO24774.1| GCPE protein [Catharanthus roseus]                      62   4e-08
ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate syntha...    62   4e-08

>gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia
           rebaudiana]
          Length = 740

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/36 (88%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = -2

Query: 456 VFVLLVEKCNKYGRAMHIGTNHGSLSD-IMSYYGDS 352
           VFV LVEKC KYGRAM IGTNHGSLSD IMSYYGDS
Sbjct: 218 VFVPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDS 253


>gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
          Length = 741

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/36 (86%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 456 VFVLLVEKCNKYGRAMHIGTNHGSLSD-IMSYYGDS 352
           VF  LVEKC KYGRAM IGTNHGSLSD IMSYYGDS
Sbjct: 218 VFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDS 253


>ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|AAO15447.1|AF435086_1
           GcpE [Solanum lycopersicum]
          Length = 740

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/36 (86%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 456 VFVLLVEKCNKYGRAMHIGTNHGSLSD-IMSYYGDS 352
           VF  LVEKC KYGRAM IGTNHGSLSD IMSYYGDS
Sbjct: 218 VFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDS 253


>gb|AAO24774.1| GCPE protein [Catharanthus roseus]
          Length = 740

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/36 (86%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 456 VFVLLVEKCNKYGRAMHIGTNHGSLSD-IMSYYGDS 352
           VF  LVEKC KYGRAM IGTNHGSLSD IMSYYGDS
Sbjct: 218 VFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDS 253


>ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
           thaliana] gi|27462472|gb|AAO15446.1|AF434673_1 GcpE
           [Arabidopsis thaliana] gi|332009971|gb|AED97354.1|
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           [Arabidopsis thaliana]
          Length = 740

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/36 (86%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 456 VFVLLVEKCNKYGRAMHIGTNHGSLSD-IMSYYGDS 352
           VF  LVEKC KYGRAM IGTNHGSLSD IMSYYGDS
Sbjct: 218 VFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDS 253


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