BLASTX nr result

ID: Atractylodes22_contig00023201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023201
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27138.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...    58   9e-07
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...    57   2e-06
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...    57   2e-06

>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/42 (64%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125  KLVALGGTNLTERFRDQFSPMFVGQKVPW-STDSTVIRMPIS 3
            K+ +L GTNLTERF DQF+PM +GQ +PW S+D TV+RMP+S
Sbjct: 2290 KVFSLIGTNLTERFCDQFNPMLIGQNMPWSSSDCTVMRMPLS 2331


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
            gi|223533501|gb|EEF35243.1| protein binding protein,
            putative [Ricinus communis]
          Length = 4704

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125  KLVALGGTNLTERFRDQFSPMFVGQKVPW-STDSTVIRMPIS 3
            K+ +L GTNLTERF DQF+PM +G+K  W S DST+IRMP+S
Sbjct: 2938 KMFSLIGTNLTERFSDQFNPMLIGEKKSWLSQDSTIIRMPLS 2979


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317873|gb|EFH48295.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125  KLVALGGTNLTERFRDQFSPMFVGQKVPWS-TDSTVIRMPIS 3
            K+ +L GTNL ERF DQF+PM +GQ   WS TDST+IRMP+S
Sbjct: 2915 KMFSLIGTNLVERFSDQFNPMLIGQDKAWSLTDSTIIRMPLS 2956


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
            thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332005740|gb|AED93123.1| C3HC4-type RING finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125  KLVALGGTNLTERFRDQFSPMFVGQKVPWS-TDSTVIRMPIS 3
            K+ +L GTNL ERF DQF+PM +GQ   WS TDST+IRMP+S
Sbjct: 2915 KMFSLIGTNLVERFSDQFNPMLIGQDKAWSLTDSTIIRMPLS 2956