BLASTX nr result

ID: Atractylodes22_contig00023165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023165
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   146   1e-33
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   146   1e-33
ref|XP_002510115.1| transcription initiation factor, putative [R...   112   2e-23
ref|XP_002520510.1| transcription initiation factor, putative [R...   104   6e-21
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  146 bits (369), Expect = 1e-33
 Identities = 88/156 (56%), Positives = 101/156 (64%), Gaps = 10/156 (6%)
 Frame = +2

Query: 17  LSSMAYVKPEPVDQMNDQQHKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRP 196
           +SSMAYVK EP DQ N+QQ KSQLSTPQ  SSF   Q+E+G AI G  KDE+ E  +SR 
Sbjct: 471 ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGILKDESLEKQASRI 530

Query: 197 NFSTSMSKPEPMSITAQLERQ-------XXXXXXXXXXXXXXXKTPPKKPSVGQKKPLEA 355
            FS+SMS   P S+++ +                         +TPPKKPS+GQKKPLEA
Sbjct: 531 GFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEA 590

Query: 356 PVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVN 454
             SS    SKKQKVSGAF DQSIEQLNDVTAVSGVN
Sbjct: 591 LGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVN 626


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  146 bits (369), Expect = 1e-33
 Identities = 88/156 (56%), Positives = 101/156 (64%), Gaps = 10/156 (6%)
 Frame = +2

Query: 17  LSSMAYVKPEPVDQMNDQQHKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRP 196
           +SSMAYVK EP DQ N+QQ KSQLSTPQ  SSF   Q+E+G AI G  KDE+ E  +SR 
Sbjct: 516 ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGILKDESLEKQASRI 575

Query: 197 NFSTSMSKPEPMSITAQLERQ-------XXXXXXXXXXXXXXXKTPPKKPSVGQKKPLEA 355
            FS+SMS   P S+++ +                         +TPPKKPS+GQKKPLEA
Sbjct: 576 GFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEA 635

Query: 356 PVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVN 454
             SS    SKKQKVSGAF DQSIEQLNDVTAVSGVN
Sbjct: 636 LGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVN 671


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score =  112 bits (281), Expect = 2e-23
 Identities = 76/157 (48%), Positives = 91/157 (57%), Gaps = 10/157 (6%)
 Frame = +2

Query: 14  LLSSMAYVKPEPVDQMNDQQHKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSR 193
           L  S  YVK EP++Q  DQQ K QLS PQG S+ +PG  EQG A+   SK+++ E  SS+
Sbjct: 472 LFPSTNYVKQEPLEQATDQQQKPQLSNPQGLSA-APG--EQGNAVPVNSKEDSLEKPSSK 528

Query: 194 PNFSTSMSKPEPMSITAQLERQXXXXXXXXXXXXXXX-------KTPPKKPSVGQKKPLE 352
             FS   +     S++  +  Q                      +TP KK S+GQKKPLE
Sbjct: 529 VGFSNPSTAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNARTPTKKLSIGQKKPLE 588

Query: 353 APVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVN 454
           A  SS    SKKQKVSGAF DQSIEQLNDVTAVSGVN
Sbjct: 589 ALGSSPPMSSKKQKVSGAFLDQSIEQLNDVTAVSGVN 625


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
           gi|223540352|gb|EEF41923.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 927

 Score =  104 bits (260), Expect = 6e-21
 Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
 Frame = +2

Query: 23  SMAYVKPEPVDQMNDQQHKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNF 202
           S  YVK EPV+Q  +Q  KSQLS PQ     S   +EQG A++   K ++ E  SS+   
Sbjct: 442 SKNYVKQEPVEQATEQHQKSQLSNPQ---DLSAAPVEQGNAVTSNLKVDSLEKQSSKVGI 498

Query: 203 STSMSKPEPMSITAQLERQXXXXXXXXXXXXXXX-------KTPPKKPSVGQKKPLEAPV 361
           S   S     S++  +  +                      +TPPKKP +GQKKPLEA  
Sbjct: 499 SIPSSMVPSSSVSTSIATRLDPIIQVGSQIQSIAASPGVNARTPPKKPLIGQKKPLEALG 558

Query: 362 SS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVN 454
           SS    SKKQK+S A SDQSIEQLNDVTAVSGVN
Sbjct: 559 SSPPMSSKKQKISVASSDQSIEQLNDVTAVSGVN 592


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score =  101 bits (252), Expect = 5e-20
 Identities = 68/157 (43%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
 Frame = +2

Query: 2   KDQSLLSSMAYVKPEPVDQMNDQQHKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEM 181
           K  +  SS+ YVKP  ++Q  +QQ+K QLS+PQ                     D++ + 
Sbjct: 440 KSPASFSSLNYVKPGLLEQAGEQQNKPQLSSPQ---------------------DQSLDK 478

Query: 182 LSSRPNFSTSMSKPEPMSITAQLE---RQXXXXXXXXXXXXXXXKTPPKKPSVGQKKPLE 352
            S++  FST      P SI  Q++   +                +TPPKKPSVGQKKP E
Sbjct: 479 QSTKIVFSTVPPNSAPPSIATQMDPNGQAGSRISSVASPAGVNARTPPKKPSVGQKKPFE 538

Query: 353 APVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVN 454
           A  SS    +KK KVSGAFSDQSIEQLNDVTAVSGVN
Sbjct: 539 ALGSSPPASTKKHKVSGAFSDQSIEQLNDVTAVSGVN 575


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