BLASTX nr result

ID: Atractylodes22_contig00023084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023084
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30590.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_003593614.1| Dof zinc finger protein [Medicago truncatula...    79   1e-12
ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...    78   1e-12
ref|XP_004134698.1| PREDICTED: dof zinc finger protein DOF3.6-li...    76   7e-12
ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...    76   7e-12

>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 81/234 (34%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
 Frame = -2

Query: 680 WTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXTNHVASTSQPVDHNPNPNLDHLSSL 501
           WTRGGTLRNVPVGGGCRKNKRVK                 +   P   + + + +H++ L
Sbjct: 144 WTRGGTLRNVPVGGGCRKNKRVKRPASSVDAPSSAPTAALNPPPPSQIDLSASSNHVTPL 203

Query: 500 YGLAPQNPN-----YQRFNT------LVSGYDFSQPQVSDAGLGFSS---------SDPG 381
           +   P NP+     + RFN+       VSGYD  QPQ+   GLGFSS          D  
Sbjct: 204 FYGLPSNPSELNLPFPRFNSRASNEDTVSGYDL-QPQLGALGLGFSSGIIANDTRTDDYR 262

Query: 380 AGF---------------LSSYPXXXXXXXXXXXXXXXXXXXSGFQQQQRF-------SD 267
            GF               LS+Y                    +   QQQ+F       S 
Sbjct: 263 NGFNPAKQIQDLVTSSSLLSNY--SIFGSSSSTTTPTMASLINSSLQQQKFMNGDLKESR 320

Query: 266 WSNHFHGQNNN----DQLQAMTSSDPSSLLWN-TPTGGWFDPTSNIDSSVPSLI 120
            +NHF    N+    +Q++ + SSDP SL WN T  G W D   N+ SSV SLI
Sbjct: 321 GANHFQPLWNSVPCQNQIEQIGSSDP-SLYWNLTSLGAWSD-LPNMGSSVTSLI 372


>ref|XP_003593614.1| Dof zinc finger protein [Medicago truncatula]
           gi|355482662|gb|AES63865.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 309

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 74/232 (31%), Positives = 95/232 (40%), Gaps = 45/232 (19%)
 Frame = -2

Query: 680 WTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXTNHVASTSQPVDHNPNPN------- 522
           WTRGGTLRNVPVGGG R+N   K S          T   + +S P   +  PN       
Sbjct: 79  WTRGGTLRNVPVGGGYRRNNSNKRSNNTTLIKIPSTIDTSISSSPSTPSSTPNTTSSNST 138

Query: 521 LDHLSS--LYGLAPQNP-----NYQRFN----TLVSGYDFSQPQVSDAGLGFSS------ 393
           L+H  S   YGL+  N       + RFN    +  SGYDF QPQ++  GLGFSS      
Sbjct: 139 LNHNISPMFYGLSSSNSCDVNLPFSRFNISRLSTSSGYDF-QPQMNTIGLGFSSGFTSSE 197

Query: 392 SDPGAGFLSSYPXXXXXXXXXXXXXXXXXXXSGFQQQQRFSDWSNHFHGQNNN------- 234
           ++   G+ + +                        Q +  +D SN F G   N       
Sbjct: 198 ANDHNGYTNGFTSRYGSIFSSSSVPSNASVMPSLLQHKFINDGSNSFQGLEFNNLGNGSE 257

Query: 233 ----------DQLQAMTSSDPSSLLWNTPT----GGWFDPTSNIDSSVPSLI 120
                     + +  +     SSL WNT +    G W D  SNI SSV SLI
Sbjct: 258 KGTKKDEGEMEHVGGLYDPAASSLYWNTASSSAIGVWNDQASNIGSSVTSLI 309


>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
           gi|222870889|gb|EEF08020.1| f-box family protein
           [Populus trichocarpa]
          Length = 322

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/116 (44%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
 Frame = -2

Query: 680 WTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXTNHVASTSQPVDHNPNPN--LDHLS 507
           WTRGGTLRNVPVGGGCRKNKRVK            +N V+S       NPNP   +DH+S
Sbjct: 63  WTRGGTLRNVPVGGGCRKNKRVK---RPASAAEGASNSVSSA------NPNPQTPIDHIS 113

Query: 506 S--------LYGLAPQNPNYQ----------RFNTLVSGYDFSQPQVSDAGLGFSS 393
           S         YGL+  NP+            R ++ VSGY   QPQ++   LGFSS
Sbjct: 114 STSNHINPLFYGLSGSNPSEMNLPFPGRFNPRMDSAVSGYHDLQPQLNALALGFSS 169


>ref|XP_004134698.1| PREDICTED: dof zinc finger protein DOF3.6-like [Cucumis sativus]
           gi|449479286|ref|XP_004155559.1| PREDICTED: dof zinc
           finger protein DOF3.6-like [Cucumis sativus]
          Length = 251

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 73/227 (32%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
 Frame = -2

Query: 680 WTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXTNHVASTSQPVDHNPNPNLDHLSSL 501
           WTRGGTLRNVPVGGGCRKNKR+K S              A+++ P   NP   L H    
Sbjct: 58  WTRGGTLRNVPVGGGCRKNKRLKTSSSSSTSVN------ANSTSPPSQNPR-LLIHNPIN 110

Query: 500 YGLAPQNPNYQRFNTLVSGYDFSQPQV--SDAGLGFSSSDPGAGFLSSYPXXXXXXXXXX 327
               P   +    N   S   F    +     GLG SSS    G LS +           
Sbjct: 111 STTVPNIVSSSALNHTNSSMFFGLDSIGGGSGGLGLSSS----GLLSHF----------- 155

Query: 326 XXXXXXXXXSGFQQQQRFSDWSNHFHG--------------------------------- 246
                         QQ FS  SNHFH                                  
Sbjct: 156 ----------NDPHQQPFS--SNHFHHPTISFDRNSHLLGNIDPNLMTSMKEIKIEDLNR 203

Query: 245 --QNNNDQLQAMTSSDPSSLLWN----TPTGGWFDPTSNIDSSVPSL 123
             QN  +Q+     SDPSS+ WN    T TG W DPT+   SSV SL
Sbjct: 204 LCQNQTEQIDLSNFSDPSSIYWNSGTTTVTGNWHDPTNYNGSSVASL 250


>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 46/107 (42%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
 Frame = -2

Query: 680 WTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXTNHVASTSQPVDHNPNPNLDHLSSL 501
           WTRGGTLRNVPVGGGCRKNKRVK                 +   P   + + + +H++ L
Sbjct: 52  WTRGGTLRNVPVGGGCRKNKRVKRPASSVDAPSSAPTAALNPPPPSQIDLSASSNHVTPL 111

Query: 500 YGLAPQNPN-----YQRFNT------LVSGYDFSQPQVSDAGLGFSS 393
           +   P NP+     + RFN+       VSGYD  QPQ+   GLGFSS
Sbjct: 112 FYGLPSNPSELNLPFPRFNSRASNEDTVSGYDL-QPQLGALGLGFSS 157


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