BLASTX nr result

ID: Atractylodes22_contig00023040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023040
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum...    77   3e-19
dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]                          73   6e-15
ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus comm...    78   7e-15
ref|XP_002304162.1| predicted protein [Populus trichocarpa] gi|2...    74   8e-14
ref|XP_002299612.1| predicted protein [Populus trichocarpa] gi|1...    72   1e-13

>gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum tuberosum]
          Length = 167

 Score = 77.4 bits (189), Expect(2) = 3e-19
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +2

Query: 230 ATGHEREELEAELQGRDILDINFPEGPFGTKEAPAVVKSY 349
           ATGHEREELEAE+QG+D+L INFPEGPFGTKEAPAVV+SY
Sbjct: 68  ATGHEREELEAEIQGKDLLAINFPEGPFGTKEAPAVVESY 107



 Score = 42.7 bits (99), Expect(2) = 3e-19
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 8/52 (15%)
 Frame = +1

Query: 1   LRSVARPNRV----ITS-SLSPATLRPSATIVTRHY---SGDVSKRVEDVMP 132
           LRS A+ NR+    +TS S SPAT RP+   ++RH+   S +V K++EDVMP
Sbjct: 15  LRSTAKSNRLSAAAVTSLSSSPATFRPTVPFISRHFSTASANVVKKIEDVMP 66


>dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]
          Length = 165

 Score = 73.2 bits (178), Expect(2) = 6e-15
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = +2

Query: 230 ATGHEREELEAELQGRDILDINFPEGPFGTKEAPAVVKSY 349
           ATG EREELEAELQG+DIL+IN P GPFGTKEAPAVVKSY
Sbjct: 66  ATGSEREELEAELQGKDILEINHPVGPFGTKEAPAVVKSY 105



 Score = 32.3 bits (72), Expect(2) = 6e-15
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = +1

Query: 13  ARPNRVITSSLSPATLRPSATIVTRHY-----SGDVSKRVEDVMP 132
           A PNR I   +SP+   PSA++  R++     SG V KRVED+MP
Sbjct: 26  ASPNRSI---ISPS---PSASLFHRYFNADAASGSVGKRVEDIMP 64


>ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus communis]
           gi|223543207|gb|EEF44739.1| cytochrome C oxidase,
           putative [Ricinus communis]
          Length = 171

 Score = 77.8 bits (190), Expect(2) = 7e-15
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +2

Query: 230 ATGHEREELEAELQGRDILDINFPEGPFGTKEAPAVVKSY 349
           ATGHEREELEAELQGRDIL+IN P GPFGTKEAPAVVKSY
Sbjct: 71  ATGHEREELEAELQGRDILEINHPVGPFGTKEAPAVVKSY 110



 Score = 27.3 bits (59), Expect(2) = 7e-15
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +1

Query: 37  SSLSPATLRPSATIVTRHYS-----GDVSKRVEDVMP 132
           S LSP+   PSA+I  R+++     G V +RVED MP
Sbjct: 36  SFLSPS---PSASIFQRYFTAEAADGAVKRRVEDAMP 69


>ref|XP_002304162.1| predicted protein [Populus trichocarpa] gi|222841594|gb|EEE79141.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 73.6 bits (179), Expect(2) = 8e-14
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +2

Query: 230 ATGHEREELEAELQGRDILDINFPEGPFGTKEAPAVVKSY 349
           ATGHEREELEAEL+G+ +LDI+FPEGPFGTKE P+V+KSY
Sbjct: 63  ATGHEREELEAELEGKKLLDIDFPEGPFGTKEEPSVIKSY 102



 Score = 28.1 bits (61), Expect(2) = 8e-14
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
 Frame = +1

Query: 64  PSATIVTRHYS-----GDVSKRVEDVMP 132
           PSA++  R+ S     G V KRVEDVMP
Sbjct: 34  PSASVFNRYLSAASVDGAVKKRVEDVMP 61


>ref|XP_002299612.1| predicted protein [Populus trichocarpa] gi|118488066|gb|ABK95853.1|
           unknown [Populus trichocarpa]
           gi|222846870|gb|EEE84417.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score = 72.4 bits (176), Expect(2) = 1e-13
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +2

Query: 230 ATGHEREELEAELQGRDILDINFPEGPFGTKEAPAVVKSY 349
           ATGHEREELEAEL+G+ +LDI++P+GPFGTKE PAV+KSY
Sbjct: 68  ATGHEREELEAELEGKKLLDIDYPDGPFGTKEKPAVIKSY 107



 Score = 28.9 bits (63), Expect(2) = 1e-13
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +1

Query: 13  ARPNRVITSSLSPATLRPSATIVTRHYSGD-----VSKRVEDVMP 132
           AR  + +  + S     PS ++  R++S D     V KRVEDVMP
Sbjct: 22  ARSTQSLLLNRSIINPSPSTSLFNRYFSADSVDGAVKKRVEDVMP 66


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