BLASTX nr result

ID: Atractylodes22_contig00023035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023035
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CBI33242.3| unnamed protein product [Vitis vinifera]              120   9e-26
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   118   4e-25
ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 486

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/93 (59%), Positives = 73/93 (78%)
 Frame = -2

Query: 284 LADQDKTKKTYGALLHCYVRQGETEKSLSHFQKMEEKGFSLSPVTFNSMMCLHMRTDQTD 105
           L DQ KT KTYGALL+CYVRQ +T+K+LSH QKM++ GF+ SP+T+N +MCL+    Q +
Sbjct: 115 LKDQHKTNKTYGALLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHE 174

Query: 104 KVHDVFKEMRKNAVSPDNLSYRMCINSHGDKLD 6
           KV DV +EM++N V PDN SYR+CINS+G + D
Sbjct: 175 KVPDVLREMKQNQVLPDNFSYRICINSYGVRSD 207


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/94 (59%), Positives = 73/94 (77%)
 Frame = -2

Query: 284 LADQDKTKKTYGALLHCYVRQGETEKSLSHFQKMEEKGFSLSPVTFNSMMCLHMRTDQTD 105
           L + DKT KTYGALL+CYVRQ +T+KSLSH QKM+E GF+ SP+T+N +MCL+    Q +
Sbjct: 133 LQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHE 192

Query: 104 KVHDVFKEMRKNAVSPDNLSYRMCINSHGDKLDI 3
           KV DV  EM+++ V PDN SYR+CINS+G + DI
Sbjct: 193 KVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDI 226


>emb|CBI33242.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/94 (59%), Positives = 73/94 (77%)
 Frame = -2

Query: 284 LADQDKTKKTYGALLHCYVRQGETEKSLSHFQKMEEKGFSLSPVTFNSMMCLHMRTDQTD 105
           L + DKT KTYGALL+CYVRQ +T+KSLSH QKM+E GF+ SP+T+N +MCL+    Q +
Sbjct: 133 LQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHE 192

Query: 104 KVHDVFKEMRKNAVSPDNLSYRMCINSHGDKLDI 3
           KV DV  EM+++ V PDN SYR+CINS+G + DI
Sbjct: 193 KVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDI 226


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = -2

Query: 284 LADQDKTKKTYGALLHCYVRQGETEKSLSHFQKMEEKGFSLSPVTFNSMMCLHMRTDQTD 105
           L + DKT KTYGALL+CYVRQ +T+KSLSH QKM+E GF+ SP+T+N +MCL+    Q +
Sbjct: 133 LQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHE 192

Query: 104 KVHDVFKEMRKNAVSPDNLSYRMCINSHGDKLDI 3
           KV DV  EM+++ V PDN SYR+CINS+  + DI
Sbjct: 193 KVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDI 226


>ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|222870880|gb|EEF08011.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/94 (55%), Positives = 73/94 (77%)
 Frame = -2

Query: 284 LADQDKTKKTYGALLHCYVRQGETEKSLSHFQKMEEKGFSLSPVTFNSMMCLHMRTDQTD 105
           L DQDK +KTYGALL+CYV++ ET+KS+SH QKM+E GF+ S +++N +MCL+    Q +
Sbjct: 123 LRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHE 182

Query: 104 KVHDVFKEMRKNAVSPDNLSYRMCINSHGDKLDI 3
           KV  V  EM++N VSPDN SYR+C+NS+G + D+
Sbjct: 183 KVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDL 216


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