BLASTX nr result

ID: Atractylodes22_contig00023031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023031
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03671.1| resistance protein candidate RGC2J [Lactuca sativa]     76   1e-23
gb|AAD03157.1| resistance protein candidate RGC2S [Lactuca sativa]     75   7e-23
gb|AAP42971.1| RGC2 resistance protein 5A [Lactuca serriola]           75   9e-23
gb|AAP42970.1| RGC2 resistance protein 5A [Lactuca serriola]           75   3e-22
gb|AAP42969.1| RGC2 resistance protein 5A [Lactuca serriola]           75   3e-22

>gb|AAD03671.1| resistance protein candidate RGC2J [Lactuca sativa]
          Length = 1847

 Score = 75.9 bits (185), Expect(2) = 1e-23
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
 Frame = +2

Query: 2    EFPNLTKVSIDWCRSLEHVFSSSMVGSLLQLQDLHISHCRSM-EVIVKESNVVVEDE--- 169
            EFP LT+V I  C SLEHVF+SSMVGSL QLQ+LHIS C+ M EVIVK+++V VE++   
Sbjct: 1687 EFPKLTRVEISNCNSLEHVFTSSMVGSLSQLQELHISQCKLMEEVIVKDADVSVEEDKEK 1746

Query: 170  EGDAKV 187
            E D K+
Sbjct: 1747 ESDGKM 1752



 Score = 58.9 bits (141), Expect(2) = 1e-23
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +3

Query: 309  LKSLQLYSLPRLKGFYLGKEAFSWPSLETLKIEGCPAIRVFT 434
            LKSL+L SLP L+GF LGKE FS+P L+TL+IE CPAI  FT
Sbjct: 1762 LKSLKLESLPSLEGFSLGKEDFSFPLLDTLRIEECPAITTFT 1803


>gb|AAD03157.1| resistance protein candidate RGC2S [Lactuca sativa]
          Length = 1813

 Score = 75.5 bits (184), Expect(2) = 7e-23
 Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
 Frame = +2

Query: 2    EFPNLTKVSIDWCRSLEHVFSSSMVGSLLQLQDLHISHCRSM-EVIVKESNVVVEDE--- 169
            EFPNLT+V I  CR LEHVF+SSMVGSLLQLQ+L IS C  M EVIVK+++V VE++   
Sbjct: 1651 EFPNLTRVHISRCRRLEHVFTSSMVGSLLQLQELDISWCNHMEEVIVKDADVSVEEDKER 1710

Query: 170  EGDAK 184
            E D K
Sbjct: 1711 ESDGK 1715



 Score = 56.6 bits (135), Expect(2) = 7e-23
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = +3

Query: 306  RLKSLQLYSLPRLKGFYLGKEAFSWPSLETLKIEGCPAIRVFT 434
            RLKSL+L  LP LKGF LGKE FS+P L+TL+I  CPAI  FT
Sbjct: 1725 RLKSLKLKCLPCLKGFSLGKEDFSFPLLDTLEIYKCPAITTFT 1767


>gb|AAP42971.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 236

 Score = 75.5 bits (184), Expect(2) = 9e-23
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
 Frame = +2

Query: 2   EFPNLTKVSIDWCRSLEHVFSSSMVGSLLQLQDLHISHCRSM-EVIVKESNVVVEDE--- 169
           EFPNLT+V I +C  LEHVF+SSMVGSLLQLQ+L IS C  M EVIVK+++V VE++   
Sbjct: 85  EFPNLTRVDISFCNRLEHVFTSSMVGSLLQLQELDISWCNHMEEVIVKDADVSVEEDKER 144

Query: 170 EGDAK 184
           E D K
Sbjct: 145 ESDGK 149



 Score = 56.2 bits (134), Expect(2) = 9e-23
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +3

Query: 306 RLKSLQLYSLPRLKGFYLGKEAFSWPSLETLKIEGCPAIRVFT 434
           RLKSL L  LP LKGF LGKE FS+P L+TLK + CPAI  FT
Sbjct: 159 RLKSLILRGLPCLKGFSLGKEDFSFPLLDTLKFKYCPAITTFT 201


>gb|AAP42970.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 236

 Score = 75.5 bits (184), Expect(2) = 3e-22
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
 Frame = +2

Query: 2   EFPNLTKVSIDWCRSLEHVFSSSMVGSLLQLQDLHISHCRSM-EVIVKESNVVVEDE--- 169
           EFPNLT+V I +C  LEHVF+SSMVGSLLQLQ+L IS C  M EVIVK+++V VE++   
Sbjct: 85  EFPNLTRVDISFCNRLEHVFTSSMVGSLLQLQELDISWCNHMEEVIVKDADVSVEEDKER 144

Query: 170 EGDAK 184
           E D K
Sbjct: 145 ESDGK 149



 Score = 54.7 bits (130), Expect(2) = 3e-22
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 306 RLKSLQLYSLPRLKGFYLGKEAFSWPSLETLKIEGCPAIRVFT 434
           RLKSL L  LP LKGF LGKE FS+P L+TL+ + CPAI  FT
Sbjct: 159 RLKSLILSGLPCLKGFSLGKEDFSFPLLDTLEFKYCPAITTFT 201


>gb|AAP42969.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 236

 Score = 75.5 bits (184), Expect(2) = 3e-22
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
 Frame = +2

Query: 2   EFPNLTKVSIDWCRSLEHVFSSSMVGSLLQLQDLHISHCRSM-EVIVKESNVVVEDE--- 169
           EFPNLT+V I +C  LEHVF+SSMVGSLLQLQ+L IS C  M EVIVK+++V VE++   
Sbjct: 85  EFPNLTRVDISFCNRLEHVFTSSMVGSLLQLQELDISWCNHMEEVIVKDADVSVEEDKER 144

Query: 170 EGDAK 184
           E D K
Sbjct: 145 ESDGK 149



 Score = 54.7 bits (130), Expect(2) = 3e-22
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +3

Query: 306 RLKSLQLYSLPRLKGFYLGKEAFSWPSLETLKIEGCPAIRVFT 434
           RLKSL L  LP LKGF LGKE FS+P L+TL+ + CPAI  FT
Sbjct: 159 RLKSLILRGLPCLKGFSLGKEDFSFPLLDTLEFKYCPAITTFT 201


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