BLASTX nr result

ID: Atractylodes22_contig00023011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023011
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   281   2e-73
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   281   2e-73
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   263   7e-68
ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synth...   248   1e-63

>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
          Length = 564

 Score =  281 bits (718), Expect = 2e-73
 Identities = 145/235 (61%), Positives = 174/235 (74%), Gaps = 1/235 (0%)
 Frame = +1

Query: 349  GYVGTDYRGLQMQKDDS-ISTIEKELETAIYKAGGIRDSNFGDLQKIGWARSSRTDKGVH 525
            GYVGT+YRGLQMQ+D+S +STIE ELETA++KAGGIRDSN+G+L KIGW RSSRTDKGVH
Sbjct: 70   GYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVH 129

Query: 526  SLSTMISLKMEIPEYAWAGDPTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTYLP 705
            SL+TMISLKMEIP  AW  DP GI                               N +LP
Sbjct: 130  SLATMISLKMEIPANAWKEDPNGIALANYV-------------------------NFHLP 164

Query: 706  KNIRVFSILPSQRSFDARRECDIRKYSYLLPVEVIGITSNFSAAEIEHHLSDFNDILKSF 885
             NI+VFSILPSQRSFDARRECD+R+YSYLLP E+IGI SN SA+EI+HH+++FNDIL +F
Sbjct: 165  NNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTF 224

Query: 886  EGKHPFHNYTVRSKYRKQYSAKRSPDRRRIANRRAKMSTDPPNAMFDESDGEESS 1050
            EG+HPF NYT+RSKYRKQ+ AK+SP    +  RRAK S +   + F+ SDGEE+S
Sbjct: 225  EGEHPFQNYTIRSKYRKQFPAKQSPGNGGVF-RRAKSSGEASTSEFEVSDGEENS 278


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  281 bits (718), Expect = 2e-73
 Identities = 145/235 (61%), Positives = 174/235 (74%), Gaps = 1/235 (0%)
 Frame = +1

Query: 349  GYVGTDYRGLQMQKDDS-ISTIEKELETAIYKAGGIRDSNFGDLQKIGWARSSRTDKGVH 525
            GYVGT+YRGLQMQ+D+S +STIE ELETA++KAGGIRDSN+G+L KIGW RSSRTDKGVH
Sbjct: 70   GYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVH 129

Query: 526  SLSTMISLKMEIPEYAWAGDPTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTYLP 705
            SL+TMISLKMEIP  AW  DP GI                               N +LP
Sbjct: 130  SLATMISLKMEIPANAWKEDPNGIALANYV-------------------------NFHLP 164

Query: 706  KNIRVFSILPSQRSFDARRECDIRKYSYLLPVEVIGITSNFSAAEIEHHLSDFNDILKSF 885
             NI+VFSILPSQRSFDARRECD+R+YSYLLP E+IGI SN SA+EI+HH+++FNDIL +F
Sbjct: 165  NNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTF 224

Query: 886  EGKHPFHNYTVRSKYRKQYSAKRSPDRRRIANRRAKMSTDPPNAMFDESDGEESS 1050
            EG+HPF NYT+RSKYRKQ+ AK+SP    +  RRAK S +   + F+ SDGEE+S
Sbjct: 225  EGEHPFQNYTIRSKYRKQFPAKQSPGNGGVF-RRAKSSGEASTSEFEVSDGEENS 278


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  271 bits (693), Expect = 2e-70
 Identities = 142/235 (60%), Positives = 172/235 (73%), Gaps = 1/235 (0%)
 Frame = +1

Query: 349  GYVGTDYRGLQMQKDDS-ISTIEKELETAIYKAGGIRDSNFGDLQKIGWARSSRTDKGVH 525
            GYVGT+YRGLQMQ+D+S +STIE ELETA++KAGGIRDSN+G+L KIGW RSSRTDKGVH
Sbjct: 70   GYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVH 129

Query: 526  SLSTMISLKMEIPEYAWAGDPTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTYLP 705
            SL+TMISLKMEIP  AW  DP GI                               N +LP
Sbjct: 130  SLATMISLKMEIPANAWKEDPNGIALANYV-------------------------NFHLP 164

Query: 706  KNIRVFSILPSQRSFDARRECDIRKYSYLLPVEVIGITSNFSAAEIEHHLSDFNDILKSF 885
             NI+VFSILPSQRSFDARRECD+R+YSYLLP E+IGI SN SA+EI+HH+++FNDIL +F
Sbjct: 165  NNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTF 224

Query: 886  EGKHPFHNYTVRSKYRKQYSAKRSPDRRRIANRRAKMSTDPPNAMFDESDGEESS 1050
            EG+HPF NYT+RSKYRKQ+ AK+SP    +  RRAK S    ++ +DE + + SS
Sbjct: 225  EGEHPFQNYTIRSKYRKQFPAKQSPGNGGVF-RRAKSSV--ISSDYDEGENQNSS 276


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 377

 Score =  263 bits (671), Expect = 7e-68
 Identities = 138/236 (58%), Positives = 167/236 (70%), Gaps = 4/236 (1%)
 Frame = +1

Query: 349  GYVGTDYRGLQMQKDD-SISTIEKELETAIYKAGGIRDSNFGDLQKIGWARSSRTDKGVH 525
            GYVGTDYRGLQ Q+D+ S+STIE ELE AI+KAGGI DSN+G+L KI WARSSRTDKGVH
Sbjct: 61   GYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLHKIAWARSSRTDKGVH 120

Query: 526  SLSTMISLKMEIPEYAWAGDPTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTYLP 705
            SL+TMIS+KMEIPE AW  DP GI                               N YLP
Sbjct: 121  SLATMISMKMEIPENAWKEDPNGIALAECV-------------------------NYYLP 155

Query: 706  KNIRVFSILPSQRSFDARRECDIRKYSYLLPVEVIGITSNFSAAEIEHHLSDFNDILKSF 885
             NIR+FSILPSQ+SFD RREC++RKYSYLLP E+IGI  +F++AEI++H+SDFNDIL +F
Sbjct: 156  DNIRIFSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAF 215

Query: 886  EGKHPFHNYTVRSKYRKQYSAK---RSPDRRRIANRRAKMSTDPPNAMFDESDGEE 1044
            EG+HPFHNYT+RSKYRKQY      R P       +RA+ S++   +  ++SDGEE
Sbjct: 216  EGEHPFHNYTIRSKYRKQYPTAITGRVP-------KRARSSSERSTSESEKSDGEE 264


>ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial
           [Glycine max]
          Length = 453

 Score =  248 bits (634), Expect = 1e-63
 Identities = 129/206 (62%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
 Frame = +1

Query: 352 YVGTDYRGLQMQKDD-SISTIEKELETAIYKAGGIRDSNFGDLQKIGWARSSRTDKGVHS 528
           YVGT+YRGLQMQ D+ S+STIEKELETAI+KAGGIR+SNFGDLQKIGWARSSRTDKGVHS
Sbjct: 53  YVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKIGWARSSRTDKGVHS 112

Query: 529 LSTMISLKMEIPEYAWAGDPTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTYLPK 708
           L+T+IS KMEIPE AW GDP G                                N+YLP 
Sbjct: 113 LATIISFKMEIPENAWNGDPYGF-------------------------GLANYVNSYLPF 147

Query: 709 NIRVFSILPSQRSFDARRECDIRKYSYLLPVEVIGITSNFSAAEIEHHLSDFNDILKSFE 888
           +I+V SILPSQRSFD R+EC +RKYSYLLP E+IGI S+FS  E+++H+S+FNDIL  FE
Sbjct: 148 DIKVISILPSQRSFDPRKECILRKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFE 206

Query: 889 GKHPFHNYTVRSKYRKQYSAKRSPDR 966
           G HPFHNYT RSKYRKQ+  ++S  +
Sbjct: 207 GIHPFHNYTARSKYRKQFPNRQSSSK 232


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