BLASTX nr result

ID: Atractylodes22_contig00023001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00023001
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    62   4e-08
ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    62   4e-08
ref|XP_003528704.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    62   5e-08
ref|XP_002322526.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002322734.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 409 PLHLEYFNFAGRIIALALMHNVQVGIAFIFFTLFFLQLAG 528
           PLHLEYF+FAGR+IALALMH VQVGI  +F  +FFLQLAG
Sbjct: 589 PLHLEYFSFAGRVIALALMHRVQVGI--VFDRVFFLQLAG 626


>ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 409 PLHLEYFNFAGRIIALALMHNVQVGIAFIFFTLFFLQLAG 528
           PLHLEYF+FAGR+IALALMH VQVGI  +F  +FFLQLAG
Sbjct: 589 PLHLEYFSFAGRVIALALMHRVQVGI--VFDRVFFLQLAG 626


>ref|XP_003528704.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 697

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +1

Query: 409 PLHLEYFNFAGRIIALALMHNVQVGIAFIFFTLFFLQLAG 528
           PLHLEYF+FAGR+IALALMH VQVGIA  F   FFLQLAG
Sbjct: 530 PLHLEYFSFAGRVIALALMHKVQVGIA--FDRAFFLQLAG 567


>ref|XP_002322526.1| predicted protein [Populus trichocarpa] gi|222867156|gb|EEF04287.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = +1

Query: 382 FFLCSIQGA-PLHLEYFNFAGRIIALALMHNVQVGIAFIFFTLFFLQLAGIN 534
           F LC+     P+HLEYF F+GR++ALALMH VQVGI  +F   FFLQLAG++
Sbjct: 6   FILCAASKVDPMHLEYFTFSGRVMALALMHKVQVGI--VFDRAFFLQLAGMH 55


>ref|XP_002322734.1| predicted protein [Populus trichocarpa] gi|222867364|gb|EEF04495.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +1

Query: 409 PLHLEYFNFAGRIIALALMHNVQVGIAFIFFTLFFLQLAGIN 534
           P+HL+YF F+GR+IALALMH VQVGI  +F  +FFLQLAG++
Sbjct: 16  PMHLDYFTFSGRVIALALMHKVQVGI--VFDRVFFLQLAGMH 55


Top