BLASTX nr result

ID: Atractylodes22_contig00022997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022997
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    64   1e-08
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    64   1e-08
dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]            63   2e-08
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido...    58   7e-07
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...    56   3e-06

>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 50/93 (53%)
 Frame = +2

Query: 5    HICRSDNMFINNKPVKDFHVVLSNNMSIVVAKVGDVQINRFITLRDVLRIPSFRFNIISS 184
            HIC    MF N    ++  V+L     + V  +GDV I+  + L+DVL IP F++N++S 
Sbjct: 1673 HICHDKFMFTNLYSAQNMFVILPTKTRLKVEHIGDVFISNDLVLKDVLYIPDFKYNLLSV 1732

Query: 185  STLTAGSEFTVQIWSNYAVIQDVKRSLMIGKAE 283
            STL    +F +    +  +IQD      IGKAE
Sbjct: 1733 STLLKDDKFAISFADSNCLIQDKWLLKTIGKAE 1765


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 50/93 (53%)
 Frame = +2

Query: 5   HICRSDNMFINNKPVKDFHVVLSNNMSIVVAKVGDVQINRFITLRDVLRIPSFRFNIISS 184
           HIC    MF N    ++  V+L     + V  +GDV I+  + L+DVL IP F++N++S 
Sbjct: 329 HICHDKFMFTNLYSAQNMFVILPTKTRLKVEHIGDVFISNDLVLKDVLYIPDFKYNLLSV 388

Query: 185 STLTAGSEFTVQIWSNYAVIQDVKRSLMIGKAE 283
           STL    +F +    +  +IQD      IGKAE
Sbjct: 389 STLLKDDKFAISFADSNCLIQDKWLLKTIGKAE 421


>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/93 (32%), Positives = 48/93 (51%)
 Frame = +2

Query: 5   HICRSDNMFINNKPVKDFHVVLSNNMSIVVAKVGDVQINRFITLRDVLRIPSFRFNIISS 184
           H+C   N+ +      +  V L     + +  +G V++N F+ L +VL IP FR N++  
Sbjct: 399 HVCHDKNLLMRLSETMNSSVTLPTGFGVKITCIGTVKLNEFLVLNNVLYIPDFRLNLLCV 458

Query: 185 STLTAGSEFTVQIWSNYAVIQDVKRSLMIGKAE 283
           S LT    + V    +Y +IQD  + LMIG+ E
Sbjct: 459 SQLTKDLGYRVTFDEDYCLIQDHVKGLMIGRGE 491


>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
           gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
           (fragment) [Arabidopsis thaliana]
          Length = 281

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/91 (30%), Positives = 57/91 (62%)
 Frame = +2

Query: 5   HICRSDNMFINNKPVKDFHVVLSNNMSIVVAKVGDVQINRFITLRDVLRIPSFRFNIISS 184
           H+  + +++++ + +++  V L N+  + +A +G +Q++  I+L +VL IP F+FN+IS 
Sbjct: 12  HVTHNRDLYLDFRSLENTFVRLPNDCRVKIAGIGFIQLSDAISLHNVLYIPEFKFNLISV 71

Query: 185 STLTAGSEFTVQIWSNYAVIQDVKRSLMIGK 277
           S LT   +  V   S+   +Q++ + LMIG+
Sbjct: 72  SVLTKFLKTKVSFTSDEFFVQELTKELMIGR 102


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
           rvp.hmm, score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/91 (35%), Positives = 50/91 (54%)
 Frame = +2

Query: 5   HICRSDNMFINNKPVKDFHVVLSNNMSIVVAKVGDVQINRFITLRDVLRIPSFRFNIISS 184
           H+C   ++F++       +V L     + ++ VG VQIN  I LR+VL +P FR N+IS 
Sbjct: 427 HVCHDKSLFVSLDHSVVSYVNLPTGSRVKISGVGSVQINENILLRNVLFLPEFRLNLISI 486

Query: 185 STLTAGSEFTVQIWSNYAVIQDVKRSLMIGK 277
           S+LT+     V    +   IQD+ + L IG+
Sbjct: 487 SSLTSDIGSRVIFDPSCCEIQDLTKDLRIGR 517


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