BLASTX nr result

ID: Atractylodes22_contig00022971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022971
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   213   1e-53
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   213   1e-53
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   209   2e-52
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   207   9e-52
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   205   3e-51

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/114 (93%), Positives = 110/114 (96%)
 Frame = -1

Query: 343  AGKHQVLIFVHSRKETTKTARAIRDTALAKDTLGFFLKEDSASREILHEHTELVKSNDLK 164
            AGKHQVLIFVHSRKET KTARAIRDTALA DTLG FLKEDSASREILH HTELVK+NDLK
Sbjct: 747  AGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLK 806

Query: 163  DLLPYGFAIHNAGMARADRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIK 2
            DLLPYGFAIH+AGMARADRQLVEELFADGH+QVLVSTATLAWGVNLPAHTVIIK
Sbjct: 807  DLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPAHTVIIK 860


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/114 (93%), Positives = 110/114 (96%)
 Frame = -1

Query: 343  AGKHQVLIFVHSRKETTKTARAIRDTALAKDTLGFFLKEDSASREILHEHTELVKSNDLK 164
            AGKHQVLIFVHSRKET KTARAIRDTALA DTLG FLKEDSASREILH HTELVK+NDLK
Sbjct: 714  AGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLK 773

Query: 163  DLLPYGFAIHNAGMARADRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIK 2
            DLLPYGFAIH+AGMARADRQLVEELFADGH+QVLVSTATLAWGVNLPAHTVIIK
Sbjct: 774  DLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPAHTVIIK 827


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  209 bits (531), Expect = 2e-52
 Identities = 104/114 (91%), Positives = 108/114 (94%)
 Frame = -1

Query: 343  AGKHQVLIFVHSRKETTKTARAIRDTALAKDTLGFFLKEDSASREILHEHTELVKSNDLK 164
            AGKHQVLIFVHSRKET KTARAIRDTALA DTLG FLKEDSASREILH HT+LVKSNDLK
Sbjct: 752  AGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHTHTDLVKSNDLK 811

Query: 163  DLLPYGFAIHNAGMARADRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIK 2
            DLLPYGFAIH+AGM R DRQLVE+LFADGH+QVLVSTATLAWGVNLPAHTVIIK
Sbjct: 812  DLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIK 865


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/114 (90%), Positives = 107/114 (93%)
 Frame = -1

Query: 343  AGKHQVLIFVHSRKETTKTARAIRDTALAKDTLGFFLKEDSASREILHEHTELVKSNDLK 164
            AGKHQVLIFVHSRKET KTARAIRD ALA DTLG FLKEDSASREILH HT+LVKSNDLK
Sbjct: 752  AGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREILHTHTDLVKSNDLK 811

Query: 163  DLLPYGFAIHNAGMARADRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIK 2
            DLLPYGFAIH+AGM R DRQLVE+LFADGH+QVLVSTATLAWGVNLPAHTVIIK
Sbjct: 812  DLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIK 865


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  205 bits (522), Expect = 3e-51
 Identities = 102/114 (89%), Positives = 108/114 (94%)
 Frame = -1

Query: 343 AGKHQVLIFVHSRKETTKTARAIRDTALAKDTLGFFLKEDSASREILHEHTELVKSNDLK 164
           AGKHQVLIFVHSRKET KTARAIRD+ALA DTLG FLKEDSASREIL  HT++VKSNDLK
Sbjct: 380 AGKHQVLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVKSNDLK 439

Query: 163 DLLPYGFAIHNAGMARADRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIK 2
           DLLPYGFAIH+AGM RADRQLVE+LFADGH+QVLVSTATLAWGVNLPAHTVIIK
Sbjct: 440 DLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIK 493


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