BLASTX nr result

ID: Atractylodes22_contig00022948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022948
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   151   6e-35
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   148   4e-34
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   147   1e-33
ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...   145   3e-33
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   144   7e-33

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  151 bits (381), Expect = 6e-35
 Identities = 91/193 (47%), Positives = 113/193 (58%), Gaps = 28/193 (14%)
 Frame = +3

Query: 15  VDARRCFSMGSFEYVMDEKSSLQVPIRTQVKKQASKKSSLPITPGHRPAMSECGGDSRRD 194
           VD RRCFSMGSFEYVMDE SSLQVPIRT VKK ++K+ SLP+TPG R AMSEC  +SRR+
Sbjct: 330 VDERRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRRE 389

Query: 195 FKGIDVV---------------CXXXXXXAIGKSKRESFSVSKIWLRGKKDQKPNSTVAA 329
           F G D V                      AIG+SKRESFS+SKIWLRGKK+   + TV +
Sbjct: 390 FSGFDAVKGGDTHMGSSSSIITGNNGNGNAIGRSKRESFSISKIWLRGKKENPSSRTVDS 449

Query: 330 AIXXXXXXXXXXXXXVHRNELK------ANRRANSDVDIGRWEN-------DQEIQTCQW 470
           +                 ++LK      +  R  S+++IGRWEN       D+E+Q+C  
Sbjct: 450 SRRAFSYRFPVHSSSAAADDLKLKNVSSSTGRTVSELEIGRWENGGSELGCDEEMQSCNS 509

Query: 471 LDSPLDQASNPPS 509
           LDS     +NPPS
Sbjct: 510 LDS----QANPPS 518


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  148 bits (374), Expect = 4e-34
 Identities = 92/198 (46%), Positives = 113/198 (57%), Gaps = 33/198 (16%)
 Frame = +3

Query: 15  VDARRCFSMGSFEYVMDEKSSLQVPIRTQVKKQASKKSSLPITPGHRPAMSECGGDSRRD 194
           VD RRCFSMGSFEYVMDE SSLQVPIRT VKK ++K+ SLP+TPG R AMSEC  +SRR+
Sbjct: 330 VDERRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRRE 389

Query: 195 FKGIDVV---------------CXXXXXXAIGKSKRESFSVSKIWLRGKKDQKPNSTVAA 329
           F G D V                      AIG+SKRESFS+SKIWLRGKK+   + TV +
Sbjct: 390 FSGFDAVKGGDTHMGSSSSIITGNNGNGNAIGRSKRESFSISKIWLRGKKENPSSRTVDS 449

Query: 330 AIXXXXXXXXXXXXXVH-----------RNELKANRRANSDVDIGRWEN-------DQEI 455
           +              VH           +N   +  R  S+++IGRWEN       D+E+
Sbjct: 450 S-----RRAFSYRFPVHSSSAAAXDXKLKNVSSSTGRTVSELEIGRWENGGSELGCDEEM 504

Query: 456 QTCQWLDSPLDQASNPPS 509
           Q+C  LDS     +NPPS
Sbjct: 505 QSCNSLDS----QANPPS 518


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score =  147 bits (370), Expect = 1e-33
 Identities = 92/197 (46%), Positives = 111/197 (56%), Gaps = 42/197 (21%)
 Frame = +3

Query: 15  VDARRCFSMGSFEYVMDEKSSLQVPIRTQVKKQAS-KKSSLPITPGHRPAMSECGGDSRR 191
           VDARRCFSMGSF YVMDE SSLQVPIRT +KKQ+S KKS LP+TPGHRPAMSEC  +SRR
Sbjct: 298 VDARRCFSMGSFAYVMDESSSLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRR 357

Query: 192 DFK--GID------------------VVCXXXXXXAIGKSKRESFSVSKIWLRGKKDQKP 311
           DFK  G D                    C      AIG+S++ESFS+SKIWLRGKKD KP
Sbjct: 358 DFKFAGFDATTIVEDDAASTGATTASTTCNGNSAAAIGRSRKESFSISKIWLRGKKD-KP 416

Query: 312 NS-------------TVAAAIXXXXXXXXXXXXXVHRNELKANRRANSDVDIGRWEN--- 443
           N+              V +++               +N     R   S++DIG+WEN   
Sbjct: 417 NAGADSSRRAVSFRFPVKSSVVAAASGSADDDDLKGKNCKFDTRSTMSEMDIGKWENGRG 476

Query: 444 -----DQEIQTCQWLDS 479
                D+E Q+C  +DS
Sbjct: 477 TEFDYDEENQSCYSMDS 493


>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score =  145 bits (366), Expect = 3e-33
 Identities = 95/202 (47%), Positives = 111/202 (54%), Gaps = 47/202 (23%)
 Frame = +3

Query: 15  VDARRCFSMGSFEYVMDEKSSLQVPIRTQVKKQAS-KKSSLPITPGHRPAMSECGGDSRR 191
           VDARRCFSMGSF YVMDE SSLQVPIRT +KKQ+S KKS LP+TPGHRPAMSEC  +SRR
Sbjct: 291 VDARRCFSMGSFAYVMDESSSLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRR 350

Query: 192 DFK--GID--------------------VVCXXXXXXAIGKSKRESFSVSKIWLRGKKDQ 305
           DFK  G D                      C      AIG+S++ESFS+SKIWLRGKKD 
Sbjct: 351 DFKFAGFDATTIIVEDDAATSTGATTSSTTCNGNSAAAIGRSRKESFSISKIWLRGKKD- 409

Query: 306 KPNSTVAAAIXXXXXXXXXXXXXV----------HRNELKA------NRRANSDVDIGRW 437
           KPNS   ++              V            ++LK        R   S++DIG+W
Sbjct: 410 KPNSVADSSRRAVSFRFPAKSSVVTAASGSAHDDDDDDLKGKNCKFDTRSTISEMDIGKW 469

Query: 438 EN--------DQEIQTCQWLDS 479
           EN        D E Q+C  LDS
Sbjct: 470 ENGGGSEFDYDDENQSCYSLDS 491


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  144 bits (363), Expect = 7e-33
 Identities = 83/176 (47%), Positives = 104/176 (59%), Gaps = 26/176 (14%)
 Frame = +3

Query: 15  VDARRCFSMGSFEYVMDEKSSLQVPIRTQVKKQASKKSSLPITPGHRPAMSECGGDSRRD 194
           VD RRCFSMGSFEYVMD+ +SLQV IRT +KKQ+SKK S+P+TPGHRPAMSEC  +SRR+
Sbjct: 289 VDERRCFSMGSFEYVMDDNTSLQVAIRTPMKKQSSKKPSIPLTPGHRPAMSECDCESRRE 348

Query: 195 FKG-------------IDVVCXXXXXXAIGKSKRESFSVSKIWLRGKKDQK--PNSTVAA 329
           F G             +  V       +IG+SKRESFS+SKIWLRG+K+++  P  +   
Sbjct: 349 FNGLFEGIRSMEANGNVSGVVTKSIGNSIGRSKRESFSISKIWLRGEKEKQKPPGDSSRR 408

Query: 330 AIXXXXXXXXXXXXXVHRNELKAN-------RRANSDVDIGRWEN----DQEIQTC 464
           A                 + LK         RR NS++ IGRWEN    D+E Q C
Sbjct: 409 AFSFRFPVNKNVVPGDEDDNLKVKNGNGSGARRTNSEIGIGRWENRFSFDEENQIC 464


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