BLASTX nr result

ID: Atractylodes22_contig00022905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022905
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif...   312   1e-82
ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycin...   296   9e-78
ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|2...   290   5e-76
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   286   7e-75
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   286   1e-74

>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
            gi|297744710|emb|CBI37972.3| unnamed protein product
            [Vitis vinifera]
          Length = 426

 Score =  312 bits (799), Expect = 1e-82
 Identities = 179/325 (55%), Positives = 208/325 (64%), Gaps = 4/325 (1%)
 Frame = -1

Query: 1140 DMLLEYWKSAGLSMEGIRMGHEIDTPVVCIVFDTEGEPXXXXXXXXXXERFLTPKWIVQF 961
            +MLLE+WKSA LSMEGIR  H+I T VVC +FD +GE           E FLT  WI QF
Sbjct: 106  NMLLEHWKSARLSMEGIRKHHDIQTSVVCHIFDGDGELAAGVASVEAIENFLTSDWIRQF 165

Query: 960  RSNIASTPIVMVDANLSPPALEASCQLAAEFGTPVWFEPXXXXXXXXXXXXXKYITFASP 781
            + NI S P++MVDANLSP ALEASCQ+AAE  TPVWFEP             KYITFASP
Sbjct: 166  KCNICSAPVLMVDANLSPSALEASCQMAAESSTPVWFEPVSVIKSRRVASVAKYITFASP 225

Query: 780  NEDELIAMANALSCKDAFSPIQKD----GSTITSLFQQLKPAIWILLEKGIKVVVLTLGS 613
            NEDELIAMANALSCKD F PIQ+D      +I SLFQ LKPAI +LLEKGIKVVVLTLGS
Sbjct: 226  NEDELIAMANALSCKDVFHPIQRDYVGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGS 285

Query: 612  KGVLLCSKGRLNFQHTGPNRNNRSHDISKKLHEAINLVCPPDRFFSALRLEGXXXXSPYV 433
             GV LCSK    F +    +  +      +L+E I   CP + F +           P+ 
Sbjct: 286  DGVFLCSKEGPGFMN-NVLKGTKPQGFGSQLYEIITESCPSNLFLNI--ATSSSKTYPFA 342

Query: 432  VHFPAIPSASVVRLTGAGDCLVGGAVASICAGLDVMQSXXXXXXXXXXXVETETNIPTVY 253
            VH PA+P ASV RLTGAGDCLVGG +AS+CAGLDV+QS           VE ETN+P+ Y
Sbjct: 343  VHLPALP-ASVARLTGAGDCLVGGTLASMCAGLDVLQSVAAGIAAAKAAVEGETNVPSEY 401

Query: 252  SLEQIAEDARSAYLGANVVFCHSML 178
            SL +IA+DAR     A V+   SML
Sbjct: 402  SLAKIADDARRVCSSAKVISHRSML 426


>ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
          Length = 390

 Score =  296 bits (757), Expect = 9e-78
 Identities = 160/324 (49%), Positives = 204/324 (62%), Gaps = 3/324 (0%)
 Frame = -1

Query: 1140 DMLLEYWKSAGLSMEGIRMGHEIDTPVVCIVFDTEGEPXXXXXXXXXXERFLTPKWIVQF 961
            ++LL  WKSAGLS+EGI    +I+TPVVC +FD  GE           E++LTP WI +F
Sbjct: 71   NLLLNQWKSAGLSIEGILKDKDIETPVVCNIFDVNGEVAAGVASVEAFEKYLTPDWIFRF 130

Query: 960  RSNIASTPIVMVDANLSPPALEASCQLAAEFGTPVWFEPXXXXXXXXXXXXXKYITFASP 781
            ++ + S P++MVDANLS P+LEA+C++A +   PVWFEP             +Y+TFASP
Sbjct: 131  KNTLLSAPVLMVDANLSHPSLEAACKMAIDMECPVWFEPVSVTKSRRISSIVEYVTFASP 190

Query: 780  NEDELIAMANALSCKDAFSPI---QKDGSTITSLFQQLKPAIWILLEKGIKVVVLTLGSK 610
            NEDELIAMANALS  D F P+   QK   ++ SLFQ LKPAIW+LLEKGIKVV++T GS 
Sbjct: 191  NEDELIAMANALSGSDEFHPLKESQKKNISVLSLFQMLKPAIWVLLEKGIKVVLVTFGSN 250

Query: 609  GVLLCSKGRLNFQHTGPNRNNRSHDISKKLHEAINLVCPPDRFFSALRLEGXXXXSPYVV 430
            GV LC+KG    Q   P           +L + +   CPP R+     L+       + V
Sbjct: 251  GVFLCNKGWPR-QFKMPAEKTNQCGFRGQLFKTVMQKCPPSRYSGFSELDRSSHL--FAV 307

Query: 429  HFPAIPSASVVRLTGAGDCLVGGAVASICAGLDVMQSXXXXXXXXXXXVETETNIPTVYS 250
            HFP++P ASVVRLTGAGDCLVGG + SICAGLD+MQS           VE E N+P+ +S
Sbjct: 308  HFPSLP-ASVVRLTGAGDCLVGGTLTSICAGLDIMQSVSVGIAVAKAVVEVEANVPSTFS 366

Query: 249  LEQIAEDARSAYLGANVVFCHSML 178
            L  I +DA+S Y GA V+F  SML
Sbjct: 367  LSAITDDAKSVYSGAKVLFPQSML 390


>ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  290 bits (742), Expect = 5e-76
 Identities = 167/328 (50%), Positives = 210/328 (64%), Gaps = 8/328 (2%)
 Frame = -1

Query: 1137 MLLEYWKSAGLSME-GIRMGHEIDTPVVCIVFDTEGEPXXXXXXXXXXERFLTPKWIVQF 961
            +LLE+W SA LS E GI    +I TPV+C +FDTEGE           E+FLT  WI Q 
Sbjct: 66   LLLEHWNSASLSTEVGIMKHQDIKTPVICNIFDTEGELAAAVASVEAVEKFLTSSWIQQS 125

Query: 960  RSNIASTPIVMVDANLSPPALEASCQLAAEFGTPVWFEPXXXXXXXXXXXXXKYITFASP 781
            + NI   P++MVDANLS PALEASCQLAAE  TPVWFEP             KY+TFASP
Sbjct: 126  KQNIFCAPVMMVDANLSLPALEASCQLAAESNTPVWFEPVSVAKSRRIVSVAKYVTFASP 185

Query: 780  NEDELIAMANALSCKDAFSPIQKDGS---TITSLFQQLKPAIWILLEKGIKVVVLTLGSK 610
            NEDELIAMANALS ++ F  I++D +   ++ SLFQ LKPAI +LLEKGIK+V +TLG+ 
Sbjct: 186  NEDELIAMANALSHENMFRHIERDSNSRCSVESLFQFLKPAILVLLEKGIKIVAVTLGAD 245

Query: 609  GVLLCSKG----RLNFQHTGPNRNNRSHDISKKLHEAINLVCPPDRFFSALRLEGXXXXS 442
            GV LCS+G    R +   T      + + +S +L++ +   CP  RF  AL++E      
Sbjct: 246  GVFLCSRGPNVVRFSLDRT------KKYGVSGQLYDKVVSSCPSSRFSGALQIERSSHL- 298

Query: 441  PYVVHFPAIPSASVVRLTGAGDCLVGGAVASICAGLDVMQSXXXXXXXXXXXVETETNIP 262
             + VHFPA+P ASVVRLTGAGDCLVGG +AS+C+GLD+MQS           VE E N+P
Sbjct: 299  -FSVHFPALP-ASVVRLTGAGDCLVGGTLASLCSGLDIMQSIAVGIAAAKSAVEGEANVP 356

Query: 261  TVYSLEQIAEDARSAYLGANVVFCHSML 178
            + +SL  I +DARS Y  A + F  SML
Sbjct: 357  SEFSLATITDDARSIYSAAKIPFHQSML 384


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  286 bits (732), Expect = 7e-75
 Identities = 160/322 (49%), Positives = 202/322 (62%), Gaps = 2/322 (0%)
 Frame = -1

Query: 1140 DMLLEYWKSAGLSMEGIRMGHEIDTPVVCIVFDTEGEPXXXXXXXXXXERFLTPKWIVQF 961
            ++L E W+ AGLS +GIR   +I T VVC V D  GE           E+FLTP+WI QF
Sbjct: 108  NLLFENWRLAGLSTQGIRKHKDIGTAVVCAVVDFHGELAAAVASVEAIEKFLTPEWIEQF 167

Query: 960  RSNIASTPIVMVDANLSPPALEASCQLAAEFGTPVWFEPXXXXXXXXXXXXXKYITFASP 781
            + NI   P++MVDANL+  ALE SCQ+AAE+ TPVWFEP             KYI+F SP
Sbjct: 168  KCNIRDAPVLMVDANLNALALEVSCQMAAEYNTPVWFEPVSVAKSRRIASVVKYISFTSP 227

Query: 780  NEDELIAMANALSCKDAFSPIQKDGS-TITSLFQQLKPAIWILLEKGIKVVVLTLGSKGV 604
            NEDELIAMANALS +D FSPI++D S TI S F+QLK A+W+LLEKGIKVVVLT+GS+GV
Sbjct: 228  NEDELIAMANALSGQDLFSPIKQDNSITIESFFEQLKSAVWVLLEKGIKVVVLTVGSRGV 287

Query: 603  LLCSKGRLNFQHTGPNRNNRSHDISKKLHEAINLVCPPDRF-FSALRLEGXXXXSPYVVH 427
             +CSKG+ +F           +  S +L   +   CPP+ F  S +  +       + +H
Sbjct: 288  FVCSKGQPSFTKISSKEELNKYKSSSQLFRTLATSCPPNMFPVSPVTKKSSVL---FAIH 344

Query: 426  FPAIPSASVVRLTGAGDCLVGGAVASICAGLDVMQSXXXXXXXXXXXVETETNIPTVYSL 247
            FPA+P ASVVRLTG GDCLVGG + SICAGL++ QS           VETE N+P  +  
Sbjct: 345  FPALP-ASVVRLTGCGDCLVGGMLTSICAGLNIYQSTAIGIATAKATVETEHNVPHEFHA 403

Query: 246  EQIAEDARSAYLGANVVFCHSM 181
             +IA+DAR  Y    +VF H M
Sbjct: 404  AKIADDARLVYTAGRLVF-HEM 424


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score =  286 bits (731), Expect = 1e-74
 Identities = 159/321 (49%), Positives = 201/321 (62%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1140 DMLLEYWKSAGLSMEGIRMGHEIDTPVVCIVFDTEGEPXXXXXXXXXXERFLTPKWIVQF 961
            ++L E W+ AGLS +GIR   +I T VVC V D  GE           E+FLTP+WI QF
Sbjct: 108  NLLFENWRLAGLSTQGIRKHKDIGTAVVCAVVDFHGELAAAVASVEAIEKFLTPEWIEQF 167

Query: 960  RSNIASTPIVMVDANLSPPALEASCQLAAEFGTPVWFEPXXXXXXXXXXXXXKYITFASP 781
            + NI   P++MVDANL+  ALE SCQ+AAE+ TPVWFEP             KYI+F SP
Sbjct: 168  KCNIRDAPVLMVDANLNALALEVSCQMAAEYNTPVWFEPVSVAKSRRIASVVKYISFTSP 227

Query: 780  NEDELIAMANALSCKDAFSPIQKDGS-TITSLFQQLKPAIWILLEKGIKVVVLTLGSKGV 604
            NEDELIAMANALS +D FSPI++D S TI S F++LK A+W+LLEKGIKVVVLT+GS+GV
Sbjct: 228  NEDELIAMANALSGQDLFSPIKQDNSITIESFFEELKSAVWVLLEKGIKVVVLTVGSRGV 287

Query: 603  LLCSKGRLNFQHTGPNRNNRSHDISKKLHEAINLVCPPDRFFSALRLEGXXXXSPYVVHF 424
             +CSKG+ +F           +  S +L   +   CPP+ F  +   E       + +HF
Sbjct: 288  FVCSKGQPSFTKISSEEELNKYKSSSQLFRTLATSCPPNMFPVSPVTEKSSVL--FAIHF 345

Query: 423  PAIPSASVVRLTGAGDCLVGGAVASICAGLDVMQSXXXXXXXXXXXVETETNIPTVYSLE 244
            PA+P ASVVRLTG GDCLVGG + SICAGL++ QS           VETE N+P  +   
Sbjct: 346  PALP-ASVVRLTGCGDCLVGGMLTSICAGLNIXQSTAIGIATAKATVETEHNVPHEFHAA 404

Query: 243  QIAEDARSAYLGANVVFCHSM 181
            +IA+DAR  Y    +VF H M
Sbjct: 405  KIADDARLVYTAGRLVF-HEM 424


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