BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022881
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   411   e-112
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   373   e-101
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]   333   3e-89
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]   331   2e-88
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]   330   4e-88

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
            gi|18266821|sp|P15629.2|POL_SOCMV RecName: Full=Enzymatic
            polyprotein; Includes: RecName: Full=Aspartic protease;
            Includes: RecName: Full=Endonuclease; Includes: RecName:
            Full=Reverse transcriptase gi|11322953|emb|CAC16945.1|
            putative reverse transcriptase [Soybean chlorotic mottle
            virus]
          Length = 692

 Score =  411 bits (1057), Expect = e-112
 Identities = 214/378 (56%), Positives = 261/378 (69%), Gaps = 20/378 (5%)
 Frame = -3

Query: 1077 YFSTFDAKSGYWQLRLAEETKPLTAFSCPP*KHYEWNVLPFGLKQAPSIYQRFMDNNLAG 898
            +FS+ DAKSGY+QLRL E TKPLTAFSCPP KHYEWNVL FGLKQAPSIYQRFMD +L G
Sbjct: 292  WFSSLDAKSGYYQLRLHENTKPLTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQSLKG 351

Query: 897  LEDICLAYIDDIIVFTKGGEEEHINAVNTVLERIKEXXXXXXXXXXXXXKTEVEYLGLKI 718
            LE ICLAYIDDI++FTKG +E+H+N V  VL+RIKE             + E+EYLGLKI
Sbjct: 352  LEHICLAYIDDILIFTKGSKEQHVNDVRIVLQRIKEKGIIISKKKSKLIQQEIEYLGLKI 411

Query: 717  GKNGILSLSTDVKEKLKLFPDKLEDRKQIQRFLGCINYIAEQGFLANIADYRRPLQKKLS 538
              NG + LS   +EK+  FPD+LEDRKQIQRFLGCINYIA +GF  N+A  R+ LQKK+S
Sbjct: 412  QGNGEIDLSPHTQEKILQFPDELEDRKQIQRFLGCINYIANEGFFKNLALERKHLQKKIS 471

Query: 537  EKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQSQDFLIVETDASKDTWSGCLRAIKNGKK 358
             K PW W T DT++V+ IK K+Q +P LYN   QDFLIVETDAS+ +WSGCLRA+  GK+
Sbjct: 472  VKNPWKWDTIDTKMVQSIKGKIQSLPKLYNASIQDFLIVETDASQHSWSGCLRALPKGKQ 531

Query: 357  ILGLNEDGSKIPD--------SINPIP------------NTNEITEYKTERFEPDLCRYV 238
             +GL+E G    D        S +  P            +T+  ++ K    E  LC+YV
Sbjct: 532  KIGLDEFGIPTADLCTGSSSASSDNSPAEIDKCHSASKQDTHVASKIKKLENELLLCKYV 591

Query: 237  SGTLSPTEQNYSVHEKETLACLKTLKKWRIELLPTRFELRTDSKYVLGFWRYKLKEDYNK 58
            SGT + TE  Y + E E LA +K L+KWRI+LL TRF LRTDSKY  GF RY +K DY  
Sbjct: 592  SGTFTDTETRYPIAELEVLAGVKVLEKWRIDLLQTRFLLRTDSKYFAGFCRYNIKTDYRN 651

Query: 57   GRLIR*QLQLHQFNPYLK 4
            GRLIR QL+L  + PY++
Sbjct: 652  GRLIRWQLRLQAYQPYVE 669


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
            virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
            Full=Enzymatic polyprotein; Includes: RecName:
            Full=Aspartic protease; Includes: RecName:
            Full=Endonuclease; Includes: RecName: Full=Reverse
            transcriptase gi|32305282|gb|AAP78924.1| putative
            multifunctional pol protein [Cestrum yellow leaf curling
            virus]
          Length = 643

 Score =  373 bits (957), Expect = e-101
 Identities = 187/359 (52%), Positives = 240/359 (66%)
 Frame = -3

Query: 1077 YFSTFDAKSGYWQLRLAEETKPLTAFSCPP*KHYEWNVLPFGLKQAPSIYQRFMDNNLAG 898
            +FST DAKSGYWQLRL  ++KPLTAFSCPP KHY+WNVLPFGLKQAP IYQ FMD NL G
Sbjct: 291  WFSTLDAKSGYWQLRLHPQSKPLTAFSCPPQKHYQWNVLPFGLKQAPGIYQNFMDKNLEG 350

Query: 897  LEDICLAYIDDIIVFTKGGEEEHINAVNTVLERIKEXXXXXXXXXXXXXKTEVEYLGLKI 718
            LE+ CLAYIDDI+VFT    EEH++ +  VLER KE             +  +++LGL +
Sbjct: 351  LENFCLAYIDDILVFTNSSREEHLSKLLVVLERCKEKGLILSKKKAIIARQTIDFLGLTL 410

Query: 717  GKNGILSLSTDVKEKLKLFPDKLEDRKQIQRFLGCINYIAEQGFLANIADYRRPLQKKLS 538
             +NG + L  +V EKL+LFPD +EDRKQ+QRFLGC+NYIA++GFL  IA   + L  K+S
Sbjct: 411  QENGEIKLQPNVLEKLELFPDAIEDRKQLQRFLGCLNYIADKGFLKEIAKETKNLYPKVS 470

Query: 537  EKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQSQDFLIVETDASKDTWSGCLRAIKNGKK 358
               PW WS  D+++V QIK K + +  LY P+ +D+LI+ETDAS DTW+GCL+A      
Sbjct: 471  ITNPWHWSDLDSKLVNQIKKKCKDLSPLYFPKPEDYLIIETDASGDTWAGCLKA------ 524

Query: 357  ILGLNEDGSKIPDSINPIPNTNEITEYKTERFEPDLCRYVSGTLSPTEQNYSVHEKETLA 178
                        + + P    N++ E         LC+Y SG  S  EQ Y+VHEKETLA
Sbjct: 525  -----------AELLFPKGTKNKVVE--------RLCKYTSGIFSSAEQKYTVHEKETLA 565

Query: 177  CLKTLKKWRIELLPTRFELRTDSKYVLGFWRYKLKEDYNKGRLIR*QLQLHQFNPYLKY 1
             LKT++KW+ ELLP  F LRTDS YV GF R+ LK +YN+GRL+R QL+  Q+   ++Y
Sbjct: 566  ALKTMRKWKAELLPKEFTLRTDSSYVTGFARHNLKANYNQGRLVRWQLEFLQYPARVEY 624


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score =  333 bits (855), Expect = 3e-89
 Identities = 171/361 (47%), Positives = 234/361 (64%), Gaps = 7/361 (1%)
 Frame = -3

Query: 1077 YFSTFDAKSGYWQLRLAEETKPLTAFSCPP*KHYEWNVLPFGLKQAPSIYQRFMDNNLAG 898
            +FST D KS YWQLRL EE+KPLTAFS PP KHYEWNVLP GLKQAP I+Q FM+ +L  
Sbjct: 288  WFSTLDVKSAYWQLRLTEESKPLTAFSYPPQKHYEWNVLPMGLKQAPGIFQEFMNRSLHN 347

Query: 897  LEDICLAYIDDIIVFTKGGEEEHINAVNTVLERIKEXXXXXXXXXXXXXKTEVEYLGLKI 718
            LE ICL Y+DDII+F++  + +H++ V  VL+R ++               E+++ GL I
Sbjct: 348  LEHICLVYVDDIIIFSEKDKNDHLSKVLQVLKRCEDEGIILSQPKAKIAHKEIDFFGLHI 407

Query: 717  GKNGILSLSTDVKEKLKLFPDKLEDRKQIQRFLGCINYIAEQGFLANIADYRRPLQKKLS 538
             +  I+ L   + EKL LFPD++E+RKQ+QRFLG +NYI+E+GF+ N A YR+ LQKK+S
Sbjct: 408  SEGEII-LQPHILEKLVLFPDEIENRKQLQRFLGNLNYISEKGFIKNFAKYRKELQKKVS 466

Query: 537  EKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQSQDFLIVETDASKDTWSGCLRAIKNGKK 358
            EK PW W++ DT  V+ +K   Q +P LYN +  D LI+ TDAS   W   + A+     
Sbjct: 467  EKVPWKWTSYDTTQVQALKALCQRLPKLYNAKESDLLIIATDASNGHWGAVMTAVTP--- 523

Query: 357  ILGLNEDGSKIPDSINPIPNTNEITEYKTERF-------EPDLCRYVSGTLSPTEQNYSV 199
             + +N  G  I D      +T +    + + F       +  L +Y SGT + TE+ Y +
Sbjct: 524  -VYINNYGISIEDLFPKEQHTAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPI 582

Query: 198  HEKETLACLKTLKKWRIELLPTRFELRTDSKYVLGFWRYKLKEDYNKGRLIR*QLQLHQF 19
            HE ETLA L+T +KW+++LL   F L+TDSKYV GF RYK+K +YN+GRLIR QL+L QF
Sbjct: 583  HELETLAVLQTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQF 642

Query: 18   N 16
            +
Sbjct: 643  S 643


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  331 bits (849), Expect = 2e-88
 Identities = 169/361 (46%), Positives = 233/361 (64%), Gaps = 7/361 (1%)
 Frame = -3

Query: 1077 YFSTFDAKSGYWQLRLAEETKPLTAFSCPP*KHYEWNVLPFGLKQAPSIYQRFMDNNLAG 898
            +FST D KS YWQLRL EE+KPLTAFS PP KHYEWNVLP GLKQAP I+Q FM+ +L  
Sbjct: 278  WFSTLDVKSAYWQLRLTEESKPLTAFSYPPQKHYEWNVLPMGLKQAPGIFQEFMNRSLHN 337

Query: 897  LEDICLAYIDDIIVFTKGGEEEHINAVNTVLERIKEXXXXXXXXXXXXXKTEVEYLGLKI 718
            LE ICL Y+DDII+F++  + +H++ V  VL+R ++               E+++ GL I
Sbjct: 338  LEHICLVYVDDIIIFSEKDKNDHLSKVLQVLKRCEDEGIILSQPKAKIAHKEIDFFGLHI 397

Query: 717  GKNGILSLSTDVKEKLKLFPDKLEDRKQIQRFLGCINYIAEQGFLANIADYRRPLQKKLS 538
             +  I+ L   + EKL LFPD++E+RKQ+QRFLG +NYI+E+GF+ + A YR+ LQKK+S
Sbjct: 398  SEGEII-LQPHILEKLVLFPDEIENRKQLQRFLGNLNYISEKGFIKDFAKYRKELQKKVS 456

Query: 537  EKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQSQDFLIVETDASKDTWSGCLRAIKNGKK 358
            EK PW W++ DT  V+ +K   Q +P LYN +  D LI+ TDAS   W   + A+     
Sbjct: 457  EKVPWKWTSYDTSQVQALKTLCQRLPKLYNAKESDLLIIATDASNGHWGAVMTAVTP--- 513

Query: 357  ILGLNEDGSKIPDSINPIPNTNEITEYKTERF-------EPDLCRYVSGTLSPTEQNYSV 199
             + +   G  + D      +T +    + + F       +  L +Y SGT + TE+ Y +
Sbjct: 514  -VHITNYGISLEDLFPKEQHTAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPI 572

Query: 198  HEKETLACLKTLKKWRIELLPTRFELRTDSKYVLGFWRYKLKEDYNKGRLIR*QLQLHQF 19
            HE ETLA L+T +KW+++LL   F L+TDSKYV GF RYK+K +YN+GRLIR QL+L QF
Sbjct: 573  HELETLAVLQTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQF 632

Query: 18   N 16
            N
Sbjct: 633  N 633


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score =  330 bits (846), Expect = 4e-88
 Identities = 169/361 (46%), Positives = 232/361 (64%), Gaps = 7/361 (1%)
 Frame = -3

Query: 1077 YFSTFDAKSGYWQLRLAEETKPLTAFSCPP*KHYEWNVLPFGLKQAPSIYQRFMDNNLAG 898
            +FST D KS YWQLRL EE+KPLTAFS PP KHYEWNV P GLKQAP I+Q FM+ +L  
Sbjct: 301  WFSTLDVKSAYWQLRLTEESKPLTAFSYPPQKHYEWNVSPMGLKQAPGIFQEFMNRSLHN 360

Query: 897  LEDICLAYIDDIIVFTKGGEEEHINAVNTVLERIKEXXXXXXXXXXXXXKTEVEYLGLKI 718
            LE ICL Y+DDII+F++  + +H+  V  VL+R +              + E+++ GL I
Sbjct: 361  LEHICLVYVDDIIIFSEKSKSDHLTKVLQVLKRCENEGIILSQPKAKIAQKEIDFFGLHI 420

Query: 717  GKNGILSLSTDVKEKLKLFPDKLEDRKQIQRFLGCINYIAEQGFLANIADYRRPLQKKLS 538
             +  I+ L   + EKL LFPD++E+RKQ+QRFLG +NYI+E+GF+ + A YR+ LQKK+S
Sbjct: 421  SEGEII-LQPHILEKLVLFPDEIENRKQLQRFLGNLNYISEKGFIRDFAKYRKELQKKVS 479

Query: 537  EKTPWSWSTEDTEIVKQIKMKVQCIPTLYNPQSQDFLIVETDASKDTWSGCLRAIKNGKK 358
            EK PW W++ DT  V+ +K   Q +P LYN +  D LI+ TDAS   W   + A+     
Sbjct: 480  EKVPWKWTSYDTTQVQALKALCQRLPKLYNAKESDLLIIATDASNGHWGAVMTAVTP--- 536

Query: 357  ILGLNEDGSKIPDSINPIPNTNEITEYKTERF-------EPDLCRYVSGTLSPTEQNYSV 199
             + +N  G  + D      +T +    + + F       +  L +Y SGT + TE+ Y +
Sbjct: 537  -VHINNYGISLEDLFPKEQHTAQALSSQYQFFGTKDFVQKELLTKYASGTFTDTEKRYPI 595

Query: 198  HEKETLACLKTLKKWRIELLPTRFELRTDSKYVLGFWRYKLKEDYNKGRLIR*QLQLHQF 19
            HE ETLA L+T +KW+++LL   F L+TDSKYV GF RYK+K +YN+GRLIR QL+L QF
Sbjct: 596  HELETLAVLQTFRKWKVDLLTKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQF 655

Query: 18   N 16
            N
Sbjct: 656  N 656