BLASTX nr result

ID: Atractylodes22_contig00022878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022878
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   106   2e-21
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002522626.1| transcription initiation factor tfiid, putat...    92   3e-17
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...    85   5e-15
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...    83   3e-14

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/93 (59%), Positives = 67/93 (72%)
 Frame = -3

Query: 279  KKNARESFACGACGQYGHMKTNKHCPKYRENSNFQVESKVPEKGPAKSTGLDPVAKPQQK 100
            KK+ARESF CGACGQ GHM+TNK+CPKY E+   QVE   PEK   KS+ L+  A+ QQ+
Sbjct: 1557 KKSARESFVCGACGQLGHMRTNKNCPKYGEDLEAQVEITEPEKASVKSSSLEHSAQLQQR 1616

Query: 99   NTVKKLIKKGGTKLAVVEATPEEEKISLKAKVL 1
              +KK+I K  TK+A+VE T E EK SLKAK L
Sbjct: 1617 TLIKKIIPKSATKMALVE-TSEGEKSSLKAKNL 1648


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/93 (59%), Positives = 67/93 (72%)
 Frame = -3

Query: 279  KKNARESFACGACGQYGHMKTNKHCPKYRENSNFQVESKVPEKGPAKSTGLDPVAKPQQK 100
            KK+ARESF CGACGQ GHM+TNK+CPKY E+   QVE   PEK   KS+ L+  A+ QQ+
Sbjct: 1287 KKSARESFVCGACGQLGHMRTNKNCPKYGEDLEAQVEITEPEKASVKSSSLEHSAQLQQR 1346

Query: 99   NTVKKLIKKGGTKLAVVEATPEEEKISLKAKVL 1
              +KK+I K  TK+A+VE T E EK SLKAK L
Sbjct: 1347 TLIKKIIPKSATKMALVE-TSEGEKSSLKAKNL 1378


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223538102|gb|EEF39713.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/93 (53%), Positives = 58/93 (62%)
 Frame = -3

Query: 279  KKNARESFACGACGQYGHMKTNKHCPKYRENSNFQVESKVPEKGPAKSTGLDPVAKPQQK 100
            KK++RE F CGACGQ GHM+TNK+CPKY E    QVE    EK   KS  LDP+ K QQK
Sbjct: 1370 KKSSREKFVCGACGQLGHMRTNKNCPKYGEEPEAQVEITDLEKSSGKSNSLDPLFKSQQK 1429

Query: 99   NTVKKLIKKGGTKLAVVEATPEEEKISLKAKVL 1
               KK + K   K+      PE EK SLKAK+L
Sbjct: 1430 LQKKKSMLKTAAKV----EDPEGEKSSLKAKLL 1458


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/91 (49%), Positives = 58/91 (63%)
 Frame = -3

Query: 279  KKNARESFACGACGQYGHMKTNKHCPKYRENSNFQVESKVPEKGPAKSTGLDPVAKPQQK 100
            KK +RE+F CGACG+ GHM+TNK+CPKY E+   Q+ES   EK   KS+ +DP +  Q K
Sbjct: 1434 KKPSRETFVCGACGKAGHMRTNKNCPKYGEDLETQLESTDMEKSSGKSSFVDPSSLSQHK 1493

Query: 99   NTVKKLIKKGGTKLAVVEATPEEEKISLKAK 7
               KK + KG TK+A V+      KI LK K
Sbjct: 1494 APSKKSMSKGTTKIAPVD---NSSKIPLKFK 1521


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/91 (48%), Positives = 57/91 (62%)
 Frame = -3

Query: 279  KKNARESFACGACGQYGHMKTNKHCPKYRENSNFQVESKVPEKGPAKSTGLDPVAKPQQK 100
            KK +RE+F CGACG+ GHM+TNK+CPKY E+   Q+ES   EK   KS+ +DP +  Q K
Sbjct: 1424 KKPSRETFVCGACGKAGHMRTNKNCPKYGEDLETQLESADMEKSSGKSSFVDPSSLSQHK 1483

Query: 99   NTVKKLIKKGGTKLAVVEATPEEEKISLKAK 7
               KK + K  TK+A V+      KI LK K
Sbjct: 1484 APSKKSMSKSATKVAPVD---NSTKIPLKFK 1511


Top