BLASTX nr result

ID: Atractylodes22_contig00022877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022877
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   120   1e-25
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...    79   4e-13
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...    77   2e-12
ref|XP_004154465.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    75   4e-12

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2    GNYESNHENLVGVKGLKMRRLPSQXXXXXXXXXXXXXXXXLCRMLMDDDEAERKKKK-VK 178
            GN ES H+   GV+GLKMRR PSQ                LCRMLMDDDEAERKKKK  +
Sbjct: 1397 GNCESKHDRTDGVRGLKMRRRPSQAQAEEEIEDEAAEAAELCRMLMDDDEAERKKKKKTR 1456

Query: 179  SGGGDMGLTALQQLNHNSKNKERLKAINTTLKPISAITRPDGSFSINENAVKSLKDDELF 358
              G + GL    QLN   +N +++K  +  +K + +  +PDGS+S  E A +  K+ E F
Sbjct: 1457 PVGEEEGLALGSQLNFGFENGQKMKKNSAVVKQLVSKVQPDGSYSQKEKAFRDSKEVESF 1516

Query: 359  PYRKNFSGKVKPKKKDDLEQVGGLLNKKLRILNDGMNILK 478
              ++N SGK K  KK+D  ++ G+L+KK++I+ DG+ + K
Sbjct: 1517 LPKRNISGKAKILKKNDAARM-GVLHKKIKIMGDGIKMFK 1555


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2    GNYESNHENLVGVKGLKMRRLPSQXXXXXXXXXXXXXXXXLCRMLMDDDEAERKKKK-VK 178
            GN ES H+   GV+GLKMRR PSQ                LCRMLMDDDEAERKKKK  +
Sbjct: 1127 GNCESKHDRTDGVRGLKMRRRPSQAQAEEEIEDEAAEAAELCRMLMDDDEAERKKKKKTR 1186

Query: 179  SGGGDMGLTALQQLNHNSKNKERLKAINTTLKPISAITRPDGSFSINENAVKSLKDDELF 358
              G + GL    QLN   +N +++K  +  +K + +  +PDGS+S  E A +  K+ E F
Sbjct: 1187 PVGEEEGLALGSQLNFGFENGQKMKKNSAVVKQLVSKVQPDGSYSQKEKAFRDSKEVESF 1246

Query: 359  PYRKNFSGKVKPKKKDDLEQVGGLLNKKLRILNDGMNILK 478
              ++N SGK K  KK+D  ++ G+L+KK++I+ DG+ + K
Sbjct: 1247 LPKRNISGKAKILKKNDAARM-GVLHKKIKIMGDGIKMFK 1285


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 35   GVKGLKMRRLPSQXXXXXXXXXXXXXXXXLCRMLMDDDEAE-RKKKKVKSGGGDMGLTAL 211
            GVKGLKMRR P+                 LCR+LMDDDEA+ +KKKK K   G+  L   
Sbjct: 1289 GVKGLKMRRHPTLAQAEEEIEDDAAEAAELCRLLMDDDEADKKKKKKAKVIVGEARLVPK 1348

Query: 212  QQLNHNSKNKERLKAINTTLKPISAITRPDGSFSINENAVKSLKDDELFPYRKNFSGKVK 391
             Q   +  N E++K I  TL       + DG+    E+A+  L+++E FP +K+ S KV 
Sbjct: 1349 MQSKFSFDNAEQVKQITNTL-------QLDGTNHWKEDAITDLREEENFPTKKSKSLKVN 1401

Query: 392  PKKKDDLEQVGGLLNKKLRILNDGMNI 472
              KK+D+  +  + NKK++ LN G  I
Sbjct: 1402 KVKKNDITPI-SIPNKKIK-LNMGEGI 1426


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 35   GVKGLKMRRLPSQXXXXXXXXXXXXXXXXLCRMLMDDDEAER-KKKKVKSGGGDMGLTAL 211
            GVKGLKMRR P+                 LCR+LMDD EA+R KKKK K   G+  L   
Sbjct: 1279 GVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDYEADRKKKKKAKVMVGEARLVPK 1338

Query: 212  QQLNHNSKNKERLKAINTTLKPISAITRPDGSFSINENAVKSLKDDELFPYRKNFSGKVK 391
             Q   +  N E++K I  TL       + DG+  + E+A+  L+++E  P +K+ S KV 
Sbjct: 1339 MQSKFSFDNAEQVKQITNTL-------QLDGTNHLKEDAITDLREEENVPAKKSKSLKVN 1391

Query: 392  PKKKDDLEQVGGLLNKKLRILNDGMNI 472
              KK+D+  +  + NKK++ LN G  I
Sbjct: 1392 KAKKNDIMPI-SIPNKKIK-LNMGEGI 1416


>ref|XP_004154465.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
            subunit 1-A-like [Cucumis sativus]
          Length = 1734

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
 Frame = +2

Query: 8    YESNHENLVGVKGLKMRRLPSQXXXXXXXXXXXXXXXXLCRMLMDDD-EAERKKKKVKSG 184
            +E  HE   GVKGLKMRR PS                 LCR+LMDD+ E  RKKKK K  
Sbjct: 1080 FEIRHEKTDGVKGLKMRRRPSIVQTEEEIEDEVAEAAELCRLLMDDEAERRRKKKKNKVM 1139

Query: 185  GGDMGLTALQQLNHNSKNKERLKAINTTLKPISAITRPDGSFSINENAVKSLKDDELFPY 364
            G  +  T  Q    + K ++         + + +I +PD ++   EN ++  K+ E    
Sbjct: 1140 GEAVLSTGFQASFFHEKPEQ--------TRHLISIAQPDVTYISKEN-IREQKEVESISN 1190

Query: 365  RKNFSGKVKPKKKDDLEQVGGLLNKKLRILNDGMNILK 478
            RK  SGK+KP KK+   ++  L+NKKL+I  D +   K
Sbjct: 1191 RKEKSGKLKPMKKNYSSEM-SLINKKLKISGDKVKNFK 1227