BLASTX nr result

ID: Atractylodes22_contig00022874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022874
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containin...   218   3e-54
ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...   207   3e-51
ref|XP_002526717.1| nucleic acid binding protein, putative [Rici...   204   4e-50
ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containin...   203   9e-50
ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [...   199   2e-48

>ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus] gi|449516906|ref|XP_004165487.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            30-like isoform 1 [Cucumis sativus]
            gi|449516908|ref|XP_004165488.1| PREDICTED: zinc finger
            CCCH domain-containing protein 30-like isoform 2 [Cucumis
            sativus]
          Length = 701

 Score =  218 bits (554), Expect = 3e-54
 Identities = 138/298 (46%), Positives = 162/298 (54%), Gaps = 28/298 (9%)
 Frame = -1

Query: 1252 SRLRSSLNARDMPXXXXXXXXXXXXXXXXXRAAHN-----------------QSILTPTK 1124
            SRLRSSL+ARDMP                     N                    +TP+ 
Sbjct: 416  SRLRSSLSARDMPVEDFDYLSDFDMQQQQLLNDLNCLSQPPLSSNSLNRSGRMKTMTPSN 475

Query: 1123 LDDIFAAESSSPRFSDQS----VFSPRPXXXXXXXXXXXXSMLSPINTNFSPKNTP---- 968
            LDD+F+AESSSPR+SDQS    VFSP              +MLSPINTNFSPKN      
Sbjct: 476  LDDLFSAESSSPRYSDQSLASAVFSPTHKSAVINQFQQQQNMLSPINTNFSPKNVDHPLL 535

Query: 967  ---FAVQSPGRMSPRSVEPISPMSSRVSMLARENXXXXQFXXXXXXXXXXXSAAILGSAV 797
               F V S GRMSPR++EPISP+ SR+SMLA+       F           S +I+GS  
Sbjct: 536  QASFGVPSSGRMSPRNLEPISPVGSRLSMLAQREKQQ--FRSLSSRELGSNSPSIVGSPA 593

Query: 796  DPWSKWGPSSEKADWGANADEFGKLRRSSSFENGGNNGEEPDLSWVQSLVKETPQEMKEK 617
            + WSKWGPS+ + DW  NADE GKLRRSSSFE  GNNGEEPDLSWVQSLVKE+P E+KEK
Sbjct: 594  NSWSKWGPSNGRPDWAVNADEMGKLRRSSSFEL-GNNGEEPDLSWVQSLVKESPTEIKEK 652

Query: 616  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXANTQIEHIDQSALSAWIEQMQLDHLVAQQ 443
                                          N+Q+E +D +AL AW+EQMQLDHLVAQQ
Sbjct: 653  ----------QAHPNLGVDSFVSSGESSNMNSQMESVDHAALGAWLEQMQLDHLVAQQ 700


>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533907|gb|EEF35632.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 728

 Score =  207 bits (528), Expect = 3e-51
 Identities = 138/295 (46%), Positives = 164/295 (55%), Gaps = 24/295 (8%)
 Frame = -1

Query: 1252 SRLRSSLNARDMPXXXXXXXXXXXXXXXXXR---------AAHNQSI-------LTPTKL 1121
            SRLRSSLNARD+                            A  N S+       LTP+ L
Sbjct: 446  SRLRSSLNARDIQADDYSMLPDFDVQQQQLLNELSSLTQPALSNNSLNRSGRLKLTPSNL 505

Query: 1120 DDIFAAESSSPRFSDQS----VFSPRPXXXXXXXXXXXXSMLSPINTNFSPKNTPF---- 965
            DD+F+AESSSPR++DQ+    VFSP              SMLSPINTNFSPKN       
Sbjct: 506  DDLFSAESSSPRYADQALASAVFSPTHKSAVLNQFQQQQSMLSPINTNFSPKNVDHPLLQ 565

Query: 964  AVQSPGRMSPRSVEPISPMSSRVSMLARENXXXXQFXXXXXXXXXXXSAAILGSAVDPWS 785
            A  + GRMSPR+VEPISPMSSR++MLA+      Q            SAAI+GS V+ WS
Sbjct: 566  ASFASGRMSPRNVEPISPMSSRMTMLAQREKQQQQLRSLSSRELGSNSAAIVGSPVNSWS 625

Query: 784  KWGPSSEKADWGANADEFGKLRRSSSFENGGNNGEEPDLSWVQSLVKETPQEMKEKLXXX 605
            KWG S+ K DW  ++DEFGKLRRS+SFE G  NGEEPDLSWVQSLVKE+P EMKEKL   
Sbjct: 626  KWGSSNGKPDWTVSSDEFGKLRRSNSFELG--NGEEPDLSWVQSLVKESPTEMKEKL--- 680

Query: 604  XXXXXXXXXXXXXXXXXXXXXXXXXANTQIEHIDQSALSAWIEQMQLDHLVAQQN 440
                                      N+QI+ +D   + AWIEQ+Q+D LVAQQN
Sbjct: 681  ------TMPVSTSVAMGASSCESSNVNSQIDSVDH-VVGAWIEQLQIDQLVAQQN 728


>ref|XP_002526717.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533906|gb|EEF35631.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 725

 Score =  204 bits (519), Expect = 4e-50
 Identities = 139/296 (46%), Positives = 164/296 (55%), Gaps = 25/296 (8%)
 Frame = -1

Query: 1252 SRLRSSLNARDMPXXXXXXXXXXXXXXXXXRA-------------AHNQS----ILTPTK 1124
            SRLRSSLNARD+P                                + N+S    ILTP+ 
Sbjct: 444  SRLRSSLNARDIPAGDYSMLPDFDVQQQQLLNELSSLTQPPLSNNSLNRSGRLKILTPSN 503

Query: 1123 LDDIFAAESSSPRFSDQS----VFSPRPXXXXXXXXXXXXSMLSPINTNFSPKNT-PFAV 959
            LDD+F AESSSPR++DQ+    VFSP              SMLSPINTNFSPKN  P  +
Sbjct: 504  LDDLFFAESSSPRYADQALASAVFSPSHKSAVLNQFQQQQSMLSPINTNFSPKNVDPHLL 563

Query: 958  QSP---GRMSPRSVEPISPMSSRVSMLARENXXXXQFXXXXXXXXXXXSAAILGSAVDPW 788
            Q+    GRMSPR+VEPISPMSSRVS+LA+      Q            SAAI+GS V+ W
Sbjct: 564  QASFASGRMSPRNVEPISPMSSRVSLLAQREKQQQQLRSLSSRELGTNSAAIVGSPVNSW 623

Query: 787  SKWGPSSEKADWGANADEFGKLRRSSSFENGGNNGEEPDLSWVQSLVKETPQEMKEKLXX 608
             KWG S+ K DW  + +EFGKLRRS+SFE G  NGEEPDLSWVQSLVKE+P EMKEK+  
Sbjct: 624  IKWGSSNGKPDWTTSNNEFGKLRRSNSFELG--NGEEPDLSWVQSLVKESPTEMKEKM-- 679

Query: 607  XXXXXXXXXXXXXXXXXXXXXXXXXXANTQIEHIDQSALSAWIEQMQLDHLVAQQN 440
                                       N+QIE +D   + AWIEQ Q+D LVAQQN
Sbjct: 680  ---------AMPVSTNGAASSRESSNVNSQIESVDH-MVGAWIEQFQIDQLVAQQN 725


>ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Vitis
            vinifera]
          Length = 703

 Score =  203 bits (516), Expect = 9e-50
 Identities = 135/296 (45%), Positives = 157/296 (53%), Gaps = 27/296 (9%)
 Frame = -1

Query: 1252 SRLRSSLNARDMPXXXXXXXXXXXXXXXXXR-----------------AAHNQSILTPTK 1124
            SRLRSSLNARD+P                                    +     LTP+ 
Sbjct: 419  SRLRSSLNARDIPAEDINLMLDFDIQQHQLLNELSCLSQPCVNSNSLNRSGRSKTLTPSN 478

Query: 1123 LDDIFAAESSSPRFSDQS----VFSPRPXXXXXXXXXXXXSMLSPINTNFSPKNTPFAV- 959
            LD++F+AESSSPR+SDQ+    V+SP              SMLSPINTNFSPKN    + 
Sbjct: 479  LDELFSAESSSPRYSDQALASAVYSPTHKSAVLNQFQQQQSMLSPINTNFSPKNVDHPLL 538

Query: 958  ----QSPGRMSPRSVEPISPMSSRVSMLA-RENXXXXQFXXXXXXXXXXXSAAILGSAVD 794
                 S GRMSPRS+EPISPMSSR SM A RE     QF           S+AI+GS ++
Sbjct: 539  QASFASSGRMSPRSMEPISPMSSRASMFAQREKQQQQQFRSLSSRDLGSNSSAIVGSPIN 598

Query: 793  PWSKWGPSSEKADWGANADEFGKLRRSSSFENGGNNGEEPDLSWVQSLVKETPQEMKEKL 614
             WSKWG S+ K DW  NA+E G  RRS+SFE  GNNGEEPDLSWVQSLVKE+P E KEK 
Sbjct: 599  SWSKWGSSNVKPDWAMNANELGGHRRSNSFEL-GNNGEEPDLSWVQSLVKESPTETKEK- 656

Query: 613  XXXXXXXXXXXXXXXXXXXXXXXXXXXXANTQIEHIDQSALSAWIEQMQLDHLVAQ 446
                                         N+QIE ID + L AW+EQMQLD LVAQ
Sbjct: 657  ---------AATPALDTAEASSSSDGSNLNSQIESIDHAVLGAWLEQMQLDQLVAQ 703


>ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type
            [Medicago truncatula] gi|355500172|gb|AES81375.1| Zinc
            finger CCCH domain-containing protein [Medicago
            truncatula]
          Length = 734

 Score =  199 bits (505), Expect = 2e-48
 Identities = 130/299 (43%), Positives = 156/299 (52%), Gaps = 28/299 (9%)
 Frame = -1

Query: 1252 SRLRSSLNARD--------MPXXXXXXXXXXXXXXXXXRAAHNQSI--------LTPTKL 1121
            SRLRSSLNARD        +                  R  ++ S+        L P+ L
Sbjct: 447  SRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNL 506

Query: 1120 DDIFAAESSSPRFSD----QSVFSPRPXXXXXXXXXXXXSMLSPINTNFSPKNTP----- 968
            DD+F+AESSSPR++D     +VFSP              +MLSP+NTNFS KN       
Sbjct: 507  DDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQ 566

Query: 967  ---FAVQSPGRMSPRSVEPISPMSSRVSMLARENXXXXQFXXXXXXXXXXXSAAILGSAV 797
               + VQ  GRMSPR+VEPISPM SR+SMLA+ +                   A  GS  
Sbjct: 567  AASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLATAGSVN 626

Query: 796  DPWSKWGPSSEKADWGANADEFGKLRRSSSFENGGNNGEEPDLSWVQSLVKETPQEMKEK 617
            + WSKW   + K DW  NADE GKLRRSSSFE  GNNGEEPDLSWVQSLVKE+P E+KEK
Sbjct: 627  NSWSKWESPNGKLDWAHNADEVGKLRRSSSFEL-GNNGEEPDLSWVQSLVKESPTEIKEK 685

Query: 616  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXANTQIEHIDQSALSAWIEQMQLDHLVAQQN 440
            L                             +TQ+E +D + L  W+EQMQLDHLVAQQN
Sbjct: 686  L----------ATSISGAAPGGSSGEGMNMSTQLESVDHAVLGTWLEQMQLDHLVAQQN 734


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