BLASTX nr result

ID: Atractylodes22_contig00022779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022779
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    73   7e-11
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    71   2e-10
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    68   2e-09
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    60   7e-07

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
 Frame = -2

Query: 749 NEDEDMLVLF---AKISNTTKGLTWIYNPVVVCKPKVGEDVTWLSYWPIG-NILDTGDEV 582
           N D+    L+   A+ISN TK L W YNP+V   P++GED+ WLS+W  G + L+ GD+V
Sbjct: 330 NTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGDQV 389

Query: 581 NVSIIVGNGLMVGECGASLQYMDGEVDQEKYETNRKEEEVI 459
           NVS  V     V +CG  L Y     +QE   T    EE++
Sbjct: 390 NVSASVTPDFQVKKCGVHLVY-----EQEDNYTLLNNEEIV 425


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
 Frame = -2

Query: 719  AKISNTTKGLTWIYNPVVVCKPKVGEDVTWLSYWPIGNILDTGDEVNVSIIVGNGLMVGE 540
            AKI+N T    W Y+P     PK  E++ WLS+W  G+ L+ GDEV++ + + +GL V +
Sbjct: 1042 AKINNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGLTVKK 1101

Query: 539  CGASLQYMDGEVDQEKYETNRKE---EEVIGGDLSEFELSRGGWYYLCRRDF 393
            CG  L Y +    QE  E++        +   D+  +EL     YYLC   F
Sbjct: 1102 CGIRLIYEEESTTQEIAESSSSSSWYRTMADTDMEAYELGTAS-YYLCHHKF 1152


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -2

Query: 722  FAKISNTTKGLTWIYNPVVVCKPKVG-EDVTWLSYWPIGNILDTGDEVNVSIIVGNGLMV 546
            +A+++N TKG  W Y+P     P+   ED+ WLSYW  G   + GD+VNVS+ +  G  V
Sbjct: 952  YARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKVNVSVRMPFGYYV 1011

Query: 545  GECGASLQYMDGEVDQE 495
             ECG  + Y + E D +
Sbjct: 1012 KECGIRIVYEENEKDNQ 1028


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = -2

Query: 722  FAKISNTTKGLTWIYNPVVVCKPKVGEDVTWLSYWPIGNILDTGDEVNVSIIVGNGLMVG 543
            + KI N TK L W Y+P+    P+  + + WLS+W + ++L+ GD++NVS ++  G    
Sbjct: 1029 YIKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDLLEGGDQLNVSAVMSTGYQAK 1088

Query: 542  ECGASLQYMDGEVDQEKYETNRKEEE 465
                 L Y     DQE  ET    EE
Sbjct: 1089 NIRIHLVY-----DQENEETELNSEE 1109


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