BLASTX nr result

ID: Atractylodes22_contig00022743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022743
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   158   1e-36
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   156   4e-36
emb|CBI21948.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   114   3e-23
ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   114   3e-23

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  158 bits (400), Expect = 1e-36
 Identities = 100/240 (41%), Positives = 128/240 (53%)
 Frame = -3

Query: 748 HDDEDAPFFSGGDSSDINGRXXXXXXXXXXXXXXXXXXXXVYARCMLXXXXXXXXXXXQI 569
           ++ ED+P F   D+ D+N +                    +YARC+L           ++
Sbjct: 27  NEGEDSPLFVHRDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIRRL 86

Query: 568 GLMVRIHSDEPPKRGLESTVIASLPILMYRDINHGPDRAGLNQECAVCLSMFEDGQMIRV 389
           GL     + EPPK GL+  VIASLPI +Y+  N   D+   +QECAVCLS+ +D +M R 
Sbjct: 87  GLATA--TSEPPKTGLDPVVIASLPIFVYKQSNG--DQEDNDQECAVCLSVLQDQEMARS 142

Query: 388 LPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAILPLPREPTTRLGSDPPSAPPMERT 209
           LPNCKH FHAECIDKWL   STCPICR E EP   I P PRE     G    +APP+E+ 
Sbjct: 143 LPNCKHTFHAECIDKWLTSHSTCPICRTEAEP--RIQPEPREGPVPAGG-AATAPPLEQV 199

Query: 208 GSISIAMEGTSDEMVQSSAKLVNGXXXXXXXXXXXXXXXXRPSQRIHSCTQEDGIEDLER 29
           G+     EGTS+   QSS+   +G                R S+RI S TQE G+EDLER
Sbjct: 200 GT-----EGTSESGNQSSSNKASG-SISRLSSFRRILSRERSSRRIQSETQEQGLEDLER 253


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  156 bits (395), Expect = 4e-36
 Identities = 101/246 (41%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
 Frame = -3

Query: 757 SDRHDDEDAPFFSGGDSSDINGRXXXXXXXXXXXXXXXXXXXXVYARCMLXXXXXXXXXX 578
           SD  DD  +   S   SSD+N +                    +YARC+L          
Sbjct: 9   SDDDDDNGSYTTSHKSSSDLNSKIMLTAIVSLSVVIALVITLHIYARCVLRRRARRRSAL 68

Query: 577 XQIGLMVRIHSDEPPKRGLESTVIASLPILMYRDINHGPDRAGLNQECAVCLSMFEDGQM 398
             I L  R+HSDEPPK GL+ +VI SLP  M++   +     G   +CAVCLS+ E+G++
Sbjct: 69  LSITLS-RVHSDEPPKTGLDQSVIDSLP--MFKFSENDTQEEGGTTDCAVCLSVLEEGEI 125

Query: 397 IRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAILPLPREPTTRLGSDPPS-APP 221
            R+LPNCKH FHAECIDKWLG  STCPICR E EP   + P PRE    + + PP+ APP
Sbjct: 126 ARLLPNCKHTFHAECIDKWLGTHSTCPICRTEAEP--RLQPEPREAMVMIRTVPPAPAPP 183

Query: 220 MERTGSISIA-MEGTSDEMVQSSAKLVNGXXXXXXXXXXXXXXXXRPSQRIHSC-TQEDG 47
            + T S S+A  EGTS+   Q SAK                      S+   SC   EDG
Sbjct: 184 SDGTNSSSLACSEGTSEGAAQCSAK---SGASTSRLSSFRRMLSRGSSRTTQSCGAPEDG 240

Query: 46  IEDLER 29
           IED+ER
Sbjct: 241 IEDVER 246


>emb|CBI21948.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  134 bits (338), Expect = 2e-29
 Identities = 80/173 (46%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
 Frame = -3

Query: 538 PPKRGLESTVIASLPILMYRDINHGPDRAGLNQECAVCLSMFEDGQMIRVLPNCKHHFHA 359
           PPK GL+ +VI SLP  M++   +     G   +CAVCLS+ E+G++ R+LPNCKH FHA
Sbjct: 9   PPKTGLDQSVIDSLP--MFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLPNCKHTFHA 66

Query: 358 ECIDKWLGGQSTCPICRHEVEPGSAILPLPREPTTRLGSDPPS-APPMERTGSISIA-ME 185
           ECIDKWLG  STCPICR E EP   + P PRE    + + PP+ APP + T S S+A  E
Sbjct: 67  ECIDKWLGTHSTCPICRTEAEP--RLQPEPREAMVMIRTVPPAPAPPSDGTNSSSLACSE 124

Query: 184 GTSDEMVQSSAKLVNGXXXXXXXXXXXXXXXXRPSQRIHSC-TQEDGIEDLER 29
           GTS+   Q SAK                      S+   SC   EDGIED+ER
Sbjct: 125 GTSEGAAQCSAK---SGASTSRLSSFRRMLSRGSSRTTQSCGAPEDGIEDVER 174


>ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus]
          Length = 229

 Score =  114 bits (284), Expect = 3e-23
 Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
 Frame = -3

Query: 625 YARCMLXXXXXXXXXXXQIGLMVRIHSDE---PPKR-GLESTVIASLPILMYRDINHGPD 458
           YAR  L           ++G++  I S +   PP R GL+  V+AS+P+++++  +  PD
Sbjct: 53  YARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPD 112

Query: 457 RAGLNQECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAIL 278
            +G   ECAVCLS   DG+  R+LPNCKH FH ECIDKW G  STCPICR E  P   +L
Sbjct: 113 PSGGGVECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAP--MML 170

Query: 277 PLPRE-PTTRLG 245
           P PRE P   +G
Sbjct: 171 PEPREGPAAEVG 182


>ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like, partial [Cucumis
           sativus]
          Length = 255

 Score =  114 bits (284), Expect = 3e-23
 Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
 Frame = -3

Query: 625 YARCMLXXXXXXXXXXXQIGLMVRIHSDE---PPKR-GLESTVIASLPILMYRDINHGPD 458
           YAR  L           ++G++  I S +   PP R GL+  V+AS+P+++++  +  PD
Sbjct: 79  YARYALRRHARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPD 138

Query: 457 RAGLNQECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAIL 278
            +G   ECAVCLS   DG+  R+LPNCKH FH ECIDKW G  STCPICR E  P   +L
Sbjct: 139 PSGGGVECAVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAP--MML 196

Query: 277 PLPRE-PTTRLG 245
           P PRE P   +G
Sbjct: 197 PEPREGPAAEVG 208


Top