BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022734
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   591   e-166
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   541   e-151
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   496   e-138
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   490   e-136
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   476   e-132

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  591 bits (1524), Expect = e-166
 Identities = 303/482 (62%), Positives = 364/482 (75%), Gaps = 8/482 (1%)
 Frame = +3

Query: 15   MAVLSHLRRALLRSPPVTTASGGARALSSSYCHVQAKNNSTAFTKVED---EKNENKKGK 185
            MAV    RR  L+S   TT   G       +C        + F    D   E +++KKGK
Sbjct: 1    MAVAVLRRRFFLQSRRETTGKVG-----DMFCISALDQQRSCFATSNDAVSEAHKSKKGK 55

Query: 186  WLTLPPFNMTVNGASLGRDIVGRRKSTGEGEAS---TTTALKWVMRCCPQLPRSLVQKFF 356
            W TLP F   V+ +SLG+ + G R     G  +   +TTALKWV+RCCPQLPRSLVQK F
Sbjct: 56   WFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLF 115

Query: 357  RLRQVRRETSEGSNIDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALPTEKVECLCS 536
            RLRQVRRE+      D  VQ    R+KRV+AKD M  GD I LPITV+  P+EK E  C+
Sbjct: 116  RLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHCN 175

Query: 537  EEELTFLHDLELYKDSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHR 716
            +EE+ F+H+LELYKD AI+V+NKPPG+ VQGGIGIKRSLDELA TYLR+D SEPPRLVHR
Sbjct: 176  DEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHR 235

Query: 717  LDRDSSGILVLGRTQLSATVLHSVFREKTVGASNIDLKSEKRFLQRKYWALVLGSPRRSQ 896
            LDRDSSGIL++GRTQ SAT+LHS+FREKT GASN D+ ++KR LQR+YWALV+GSPRR +
Sbjct: 236  LDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPR 295

Query: 897  GLISVPLGKVVMDDGRSERITVVENVSTTPSQHAMTEYRVLDSSNHGLTWLELSPLTGRK 1076
            GLIS PLGKVV+DDG+SERIT+V+NV T  SQHA+TEYRV+ SS HG TWLELSPLTGRK
Sbjct: 296  GLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRK 355

Query: 1077 HQIRVHCAEVLGTPIVGDYKYGWQAHKKWNQLFSSNLEEKVE--ACKRKSLPFGLDLANG 1250
            HQ+RVHCAEVLGTPIVGDYKYGWQAH+KW QLF SN+E+ ++     RK+ PFGLDL +G
Sbjct: 356  HQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESG 415

Query: 1251 SISDKQPNLHLHCKKMVLPDVSSALKRAHISSPDYDFGDIESLKFAAPLPPHMQRSWDIL 1430
            SI DKQP+LHLHCK+MVLP+VS AL+   +S+ + D  ++ESL+F APLP HMQRSWDIL
Sbjct: 416  SILDKQPHLHLHCKQMVLPNVSLALQNLQLSA-ECDLSELESLEFVAPLPSHMQRSWDIL 474

Query: 1431 CS 1436
             S
Sbjct: 475  NS 476


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  541 bits (1394), Expect = e-151
 Identities = 277/450 (61%), Positives = 339/450 (75%), Gaps = 4/450 (0%)
 Frame = +3

Query: 99   SSYCHVQAKNNSTAFTKVEDEKNENKK-GKWLTLPPFNMTVNGASLGRDIVGRRKSTGEG 275
            S Y        + + TK +  KN  K  GK+ TLPP+  T++G++LG+ +     +T   
Sbjct: 98   SHYFTTTTITQTKSSTKDQTSKNNTKNTGKFFTLPPYTSTISGSALGKAL----SATATA 153

Query: 276  EAST-TTALKWVMRCCPQLPRSLVQKFFRLRQVRRETSEGSNIDQDVQAPGCRVKRVSAK 452
            +AST TTALKWV+RCCP+LPR+LVQK FRLRQV+RE     + + +      + KRV+AK
Sbjct: 154  KASTETTALKWVLRCCPELPRNLVQKLFRLRQVKRELLNVGDGEMEH-----KTKRVAAK 208

Query: 453  DSMKFGDTIYLPITVQALPTEKVECLCSEEELTFLHDLELYKDSAILVINKPPGMAVQGG 632
            D M  GD I+LPI+VQALP EK +C C E+E  F+  LELYKD AI+V+NKPPGM VQGG
Sbjct: 209  DLMNVGDRIFLPISVQALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGG 268

Query: 633  IGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDSSGILVLGRTQLSATVLHSVFREKTVGA 812
            IGIK S DELA + L +D+SEPPRLVHRLDRDSSGILV+GRTQ S  VLHSVFREKT  A
Sbjct: 269  IGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAA 328

Query: 813  SNIDLKSEKRFLQRKYWALVLGSPRRSQGLISVPLGKVVMDDGRSERITVVENVSTTPSQ 992
            SN D+   +R LQRKYWALV+GSPRR +G+IS PLGKVV+DDG+S+RITVVEN  +T  Q
Sbjct: 329  SNHDIGERRRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQ 388

Query: 993  HAMTEYRVLDSSNHGLTWLELSPLTGRKHQIRVHCAEVLGTPIVGDYKYGWQAHKKWNQL 1172
            HA+T+YRV++SS HG  WLELSP+TGRKHQ+RVHCAEVLGTPIVGDYKYGWQ H+KW QL
Sbjct: 389  HAVTQYRVMESS-HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQL 447

Query: 1173 FSSNLEE--KVEACKRKSLPFGLDLANGSISDKQPNLHLHCKKMVLPDVSSALKRAHISS 1346
               NLE+     A  +K LPFG+DL +GSIS+K P LHLHCK+MVLPDVS AL+    SS
Sbjct: 448  PFPNLEKISNENALCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSS 507

Query: 1347 PDYDFGDIESLKFAAPLPPHMQRSWDILCS 1436
             +YDF D++S++  APLP +MQRSWDIL S
Sbjct: 508  -NYDFSDLKSIELDAPLPSYMQRSWDILNS 536


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  496 bits (1278), Expect = e-138
 Identities = 262/466 (56%), Positives = 329/466 (70%), Gaps = 4/466 (0%)
 Frame = +3

Query: 45   LLRSPPVTTASGGARALSSSYCHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFNMTVNG 224
            L  SP  T  SG     S  +        S A   V  +KNE    +W TLPP+  TVNG
Sbjct: 13   LRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATVNG 72

Query: 225  ASLGRDIV--GRRKSTGEGEASTTTALKWVMRCCPQLPRSLVQKFFRLRQVRRETSEGSN 398
            + LG  I+  G +   G   A+ T ALKWV+RCCP+LPRSLVQK FRLR+VRR +S   N
Sbjct: 73   SILGNRIMNGGGQAELGASTAAIT-ALKWVIRCCPELPRSLVQKLFRLRKVRRGSSMIEN 131

Query: 399  IDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALPTEKVECLCSEEELTFLHDLELYK 578
             + +++A   ++KRV+AKD +  GD I+LP++VQ   TEK    C++EE TF+H L L+K
Sbjct: 132  SEYNLEARD-QLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHK 190

Query: 579  DSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDSSGILVLGRT 758
            D AILVINKPPG+ VQGGIG+KRSLDELA + L + +SEPPRLVHRLDRDSSGIL++GRT
Sbjct: 191  DPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRT 250

Query: 759  QLSATVLHSVFREKTVGASN--IDLKSEKRFLQRKYWALVLGSPRRSQGLISVPLGKVVM 932
              S ++LHSVFREKT  AS     + SEK+ L ++YWALV+GSPRRS+GLI+ PLGK+V+
Sbjct: 251  STSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVL 310

Query: 933  DDGRSERITVVENVSTTPSQHAMTEYRVLDSSNHGLTWLELSPLTGRKHQIRVHCAEVLG 1112
            DDGRSE+I V++N    P Q A+T+Y+V+  S+HG TWLEL PLTGRKHQ+RVHCAEVLG
Sbjct: 311  DDGRSEQIMVIDNAEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLG 369

Query: 1113 TPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQPNLHLHCK 1292
            TPIVGDYKYGWQAHK W   F SN  +     K++ LPFGLD  +GSI++  P LHLHCK
Sbjct: 370  TPIVGDYKYGWQAHKNWKP-FCSNFHK--NQGKKQFLPFGLDFESGSIAENSPRLHLHCK 426

Query: 1293 KMVLPDVSSALKRAHISSPDYDFGDIESLKFAAPLPPHMQRSWDIL 1430
            ++ LPDVS AL   H  S D D   +E L+  APLP +MQ+SWDI+
Sbjct: 427  QLTLPDVSFAL---HNDSLDRDCSRLECLELDAPLPSYMQKSWDII 469


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 466

 Score =  490 bits (1261), Expect = e-136
 Identities = 260/468 (55%), Positives = 324/468 (69%), Gaps = 4/468 (0%)
 Frame = +3

Query: 45   LLRSPPVTTASGGARALSSSYCHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFNMTVNG 224
            L  SP  T  SG     S  +        S A   V  +KNE    +W TLPP+  TVNG
Sbjct: 13   LRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATVNG 72

Query: 225  ASLGRDIV--GRRKSTGEGEASTTTALKWVMRCCPQLPRSLVQKFFRLRQVRRETSEGSN 398
            + LG  I+  G +   G   A+ T ALKWV+RCCP+LPRSLVQK FRLR+V R+ + G  
Sbjct: 73   SILGNRIMNGGGQAELGASTAAIT-ALKWVIRCCPELPRSLVQKLFRLRKVPRQLNVGCG 131

Query: 399  IDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITVQALPTEKVECLCSEEELTFLHDLELYK 578
                      ++KRV+AKD +  GD I+LP++VQ   TEK    C++EE TF+H L L+K
Sbjct: 132  NSHH------QLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHK 185

Query: 579  DSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDSSGILVLGRT 758
            D AILVINKPPG+ VQGGIG+KRSLDELA + L + +SEPPRLVHRLDRDSSGIL++GRT
Sbjct: 186  DPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRT 245

Query: 759  QLSATVLHSVFREKTVGASN--IDLKSEKRFLQRKYWALVLGSPRRSQGLISVPLGKVVM 932
              S ++LHSVFREKT  AS     + SEK+ L ++YWALV+GSPRRS+GLI+ PLGK+V+
Sbjct: 246  STSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVL 305

Query: 933  DDGRSERITVVENVSTTPSQHAMTEYRVLDSSNHGLTWLELSPLTGRKHQIRVHCAEVLG 1112
            DDGRSE+I V++N    P Q A+T+Y+V+  S+HG TWLEL PLTGRKHQ+RVHCAEVLG
Sbjct: 306  DDGRSEQIMVIDNAEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLG 364

Query: 1113 TPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQPNLHLHCK 1292
            TPIVGDYKYGWQAHK W   F SN  +     K++ LPFGLD  +GSI++  P LHLHCK
Sbjct: 365  TPIVGDYKYGWQAHKNWKP-FCSNFHK--NQGKKQFLPFGLDFESGSIAENNPRLHLHCK 421

Query: 1293 KMVLPDVSSALKRAHISSPDYDFGDIESLKFAAPLPPHMQRSWDILCS 1436
            ++ LPDVS AL   H  S D D   +E L+  APLP +MQ+SWDI+ S
Sbjct: 422  QLTLPDVSFAL---HNDSLDRDCSRLECLELDAPLPSYMQKSWDIINS 466


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
            gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
            pseudourine synthase 4, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 4; AltName: Full=RNA-uridine
            isomerase 4; Flags: Precursor gi|11994467|dbj|BAB02469.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|110737723|dbj|BAF00800.1| hypothetical protein
            [Arabidopsis thaliana] gi|134031916|gb|ABO45695.1|
            At3g19440 [Arabidopsis thaliana]
            gi|332642719|gb|AEE76240.1| RNA pseudourine synthase 4
            [Arabidopsis thaliana]
          Length = 477

 Score =  476 bits (1224), Expect = e-132
 Identities = 259/475 (54%), Positives = 333/475 (70%), Gaps = 7/475 (1%)
 Frame = +3

Query: 33   LRRALLRSPP-VTTASGGARALSSSYCHVQAKNNSTAFTKVEDEKNENKKGKWLTLPPFN 209
            LRR L  S P ++T     +ALS++  H   ++ ST  T       ++ +GKWLTLPPF+
Sbjct: 11   LRRQLQSSSPTISTFKNPTKALSAA-AHQSTRSYSTTQT-------DDSRGKWLTLPPFS 62

Query: 210  MTVNGASLGRDIVGRRKSTGEG-EASTTTALKWVMRCCPQLPRSLVQKFFRLRQVRRETS 386
             T++G ++G+D++    S     + S TTAL+W++RC P LPR+LVQK FRLRQVRRE S
Sbjct: 63   PTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREMS 122

Query: 387  EGSNIDQDVQAPGCRVKRVSAKDSMKFGDTIYLPITV-----QALPTEKVECLCSEEELT 551
               ++D D +    ++KRV+AK+S+  GD IYLP++V     Q  P +K    CS+EE  
Sbjct: 123  --MSVDGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERK 179

Query: 552  FLHDLELYKDSAILVINKPPGMAVQGGIGIKRSLDELAGTYLRHDFSEPPRLVHRLDRDS 731
            F+  L LYKD AI+V+NKP G+AVQGG GIK S+DELA + L+ D SE PRLVHRLDRD 
Sbjct: 180  FVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDC 239

Query: 732  SGILVLGRTQLSATVLHSVFREKTVGASNIDLKSEKRFLQRKYWALVLGSPRRSQGLISV 911
            SG+LVL RTQ +ATVLHS+FREKT GAS   +K   + L+RKY ALV+G P R +G IS 
Sbjct: 240  SGLLVLARTQTAATVLHSIFREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISA 299

Query: 912  PLGKVVMDDGRSERITVVENVSTTPSQHAMTEYRVLDSSNHGLTWLELSPLTGRKHQIRV 1091
            PL KVV+DDG+SERITV +N     +QHA+TEYRV++SS HG TWLEL PLTGRKHQ+RV
Sbjct: 300  PLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRV 359

Query: 1092 HCAEVLGTPIVGDYKYGWQAHKKWNQLFSSNLEEKVEACKRKSLPFGLDLANGSISDKQP 1271
            HCAEVLGTPIVGDYKYGWQAHK      SS    +    K+ S PFGLDL  G +S KQP
Sbjct: 360  HCAEVLGTPIVGDYKYGWQAHKAREPFVSS----ENNPTKQSSSPFGLDLDGGDVSSKQP 415

Query: 1272 NLHLHCKKMVLPDVSSALKRAHISSPDYDFGDIESLKFAAPLPPHMQRSWDILCS 1436
            +LHLH K++ LP++S  L++  +SS D D  D++SLKF APLP HMQ S+++L S
Sbjct: 416  HLHLHSKQIDLPNISQLLEKMQVSS-DSDISDLDSLKFDAPLPSHMQLSFNLLKS 469