BLASTX nr result

ID: Atractylodes22_contig00022728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022728
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319004.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...    85   5e-15
ref|XP_002874909.1| ATCUL1 [Arabidopsis lyrata subsp. lyrata] gi...    84   2e-14
ref|XP_002266031.1| PREDICTED: cullin-1 [Vitis vinifera] gi|2960...    84   2e-14
ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...    83   2e-14

>ref|XP_002319004.1| predicted protein [Populus trichocarpa] gi|222857380|gb|EEE94927.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/91 (54%), Positives = 59/91 (64%)
 Frame = +3

Query: 3   LEESITSRVMPALKDKTHVYLLYELWNMWAKYKVMAKCLGGFFLYLDRHFVEDRKAVSLT 182
           LEESI S V+P+  DK    LL EL  MW+ YK+M K L  FF  +DRHFV +    SL 
Sbjct: 45  LEESINSVVLPSFVDKRDALLLRELILMWSNYKMMTKWLCKFFESIDRHFVPNICYCSLN 104

Query: 183 DLSICCFHDLVCSEFYPKFLEAAISLINQDR 275
           D+S   FHDLV  EFY KF + AISLINQ+R
Sbjct: 105 DISNNNFHDLVFKEFYVKFQDVAISLINQER 135


>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
           gi|297736859|emb|CBI26060.3| unnamed protein product
           [Vitis vinifera]
          Length = 744

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/95 (42%), Positives = 61/95 (64%)
 Frame = +3

Query: 6   EESITSRVMPALKDKTHVYLLYELWNMWAKYKVMAKCLGGFFLYLDRHFVEDRKAVSLTD 185
           EE IT+ V+P+L++K   ++L EL   W+ +KVM + L  FF YLDR+F+  R   +L +
Sbjct: 74  EEYITTTVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPALNE 133

Query: 186 LSICCFHDLVCSEFYPKFLEAAISLINQDRDENSV 290
           + + CF DLV  E Y K  +A ISLI+Q+R+   +
Sbjct: 134 VGLTCFRDLVYQELYSKVRDAVISLIDQEREGEQI 168


>ref|XP_002874909.1| ATCUL1 [Arabidopsis lyrata subsp. lyrata]
           gi|297320746|gb|EFH51168.1| ATCUL1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 738

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/95 (41%), Positives = 60/95 (63%)
 Frame = +3

Query: 6   EESITSRVMPALKDKTHVYLLYELWNMWAKYKVMAKCLGGFFLYLDRHFVEDRKAVSLTD 185
           EE I S V+PAL++K   Y+L EL   W+ +KVM + L  FF YLDR+F+  R    L +
Sbjct: 71  EEYINSTVLPALREKHDEYMLRELVKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNE 130

Query: 186 LSICCFHDLVCSEFYPKFLEAAISLINQDRDENSV 290
           + + CF DLV +E + K  EA I+L++++R+   +
Sbjct: 131 VGLTCFRDLVYNELHSKVKEAVIALVDKEREGEQI 165


>ref|XP_002266031.1| PREDICTED: cullin-1 [Vitis vinifera] gi|296086608|emb|CBI32243.3|
           unnamed protein product [Vitis vinifera]
          Length = 741

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/95 (42%), Positives = 60/95 (63%)
 Frame = +3

Query: 6   EESITSRVMPALKDKTHVYLLYELWNMWAKYKVMAKCLGGFFLYLDRHFVEDRKAVSLTD 185
           EE IT  V+P+L+DK   ++L EL   WA +KVM K L  FF YLDR+F+  R   +L +
Sbjct: 74  EEYITVTVLPSLRDKHDEFMLRELVKRWANHKVMVKWLSRFFYYLDRYFIARRSLPALNE 133

Query: 186 LSICCFHDLVCSEFYPKFLEAAISLINQDRDENSV 290
           + + CF +LV  E + +  +A ISLI+Q+R+   +
Sbjct: 134 VGLACFRELVYQEVHGRVKDAVISLIDQEREGEQI 168


>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/95 (43%), Positives = 59/95 (62%)
 Frame = +3

Query: 6   EESITSRVMPALKDKTHVYLLYELWNMWAKYKVMAKCLGGFFLYLDRHFVEDRKAVSLTD 185
           EE ITS V+P+L++K   ++L EL   WA +KVM + L  FF YLDR+F+  R    L +
Sbjct: 74  EEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNE 133

Query: 186 LSICCFHDLVCSEFYPKFLEAAISLINQDRDENSV 290
           + + CF DLV  E   K  +A ISLI+Q+R+   +
Sbjct: 134 VGLTCFRDLVYQELNAKVRDAVISLIDQEREGEQI 168


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