BLASTX nr result

ID: Atractylodes22_contig00022723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022723
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...    69   3e-10
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-l...    56   3e-06
ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...    55   5e-06

>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
 Frame = +1

Query: 265  QPSWVTEEEFGIGYLDLKPATSLASKSV---YVAPVASTDLNMPPSEAASSRTASSG-QH 432
            +PSWVT+EEFG+GYL+LKPA SLASKS+    VA    + LN+  +E++  RT +SG QH
Sbjct: 1221 KPSWVTDEEFGMGYLELKPAPSLASKSLAGNLVAVPNGSGLNIFQNESSGGRTVASGTQH 1280

Query: 433  HDSGASIRETI 465
             D+G S++E +
Sbjct: 1281 LDAGNSVKEQV 1291


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
            predicted protein [Populus trichocarpa]
          Length = 1805

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
 Frame = +1

Query: 265  QPSWVTEEEFGIGYLDLKPATSLASKSV---YVAPVASTDLNMPPSEAASSRTASSG-QH 432
            +PSWVT+EEFG+GYLD+KP  S+ASKS+     A   S+ LN+   E A  R   +G QH
Sbjct: 1191 KPSWVTDEEFGMGYLDIKP-PSVASKSLSGNVAAAQNSSALNVSQGEPADGRALVTGSQH 1249

Query: 433  HDSGASIRETIS 468
             D G S R+ IS
Sbjct: 1250 GDPGNSNRDPIS 1261


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
            predicted protein [Populus trichocarpa]
          Length = 1836

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +1

Query: 265  QPSWVTEEEFGIGYLDLKPATSLASKSV---YVAPVASTDLNMPPSEAASSRTASSG-QH 432
            +PSW+T+EEFG+GYL++KP  S ASKS+     A   S+ LN+   E A  R   +G QH
Sbjct: 1201 KPSWITDEEFGMGYLEIKP-PSAASKSLSGNAAAAQNSSALNVSQGEPAEGRAPHTGSQH 1259

Query: 433  HDSGASIRETIS 468
             D G S RE IS
Sbjct: 1260 GDPGNSTREQIS 1271


>ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-like [Glycine max]
          Length = 1728

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/65 (41%), Positives = 42/65 (64%)
 Frame = +1

Query: 265  QPSWVTEEEFGIGYLDLKPATSLASKSVYVAPVASTDLNMPPSEAASSRTASSGQHHDSG 444
            +PSWVT+EEFG+GYL+LKPA S+   S   +    + +N+  S+  S    +SG+H DSG
Sbjct: 1128 KPSWVTDEEFGMGYLELKPAPSVTKSSAGNSATVQSGINLNVSQTES----ASGKHVDSG 1183

Query: 445  ASIRE 459
              +++
Sbjct: 1184 NIVKD 1188


>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +1

Query: 265  QPSWVTEEEFGIGYLDLKPATSLASKSVYVAPVASTDLNMPPSEAASSRTASSGQHHDSG 444
            +PSWVT+EEFG+GYL+LKP+ S+   S   +    + +N+  S+  S     SG+H DSG
Sbjct: 1220 KPSWVTDEEFGMGYLELKPSPSMTKSSAGNSATVQSGINLNVSQTES----VSGKHVDSG 1275

Query: 445  ASIRE 459
             ++++
Sbjct: 1276 NTVKD 1280


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