BLASTX nr result

ID: Atractylodes22_contig00022721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022721
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16337.3| unnamed protein product [Vitis vinifera]               77   2e-11
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu...    65   5e-08
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    63   2e-07
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...    62   4e-07
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    62   6e-07

>emb|CBI16337.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
 Frame = +3

Query: 930  SNLRTKNVDEEPCLTLSASPAVAEIQSDIPPACNLVLDITSDGQTLPCDSGVSVHP--AE 1103
            S   T   D +    L  +P     Q+   P+ NL ++    G+       V V P   E
Sbjct: 290  SERHTSFHDVQAPARLVENPVELSNQAISQPSMNLEIEHQPSGEGHASFQNVQVAPLLGE 349

Query: 1104 NHEKSSDHPSLQSRVNMEGHPLVS--ADTPLSEQQPNLCSADRVD--CQPLNPS-QRPEA 1268
            N  + S+  +LQ+  ++      S    +  + Q P     D V+  C+    S Q  + 
Sbjct: 350  NPVELSNQAALQTGAHLATEQSSSELGSSIQNSQTPTQLVEDSVENTCREGGSSFQNAQT 409

Query: 1269 PPQVLEITTQVSSQAATLPGPHLSNVQ-------GSDNH----IHWDSRTP--------- 1388
            P Q++E + ++ +QA +    HL+  Q       GSD      I   S  P         
Sbjct: 410  PTQLVESSVELLNQAVSQSVTHLAVHQPIDTLAGGSDTRTTPIISGLSNRPIQTAPPVPL 469

Query: 1389 ----PFSFDPLQAELEKLHELKDTVIKCHEAIKLKLKSDYEKELAEMIAQLKLKYEAKRQ 1556
                P   DPLQ ELE++ +  D  IK HE  K +LKSD EKE+ E++AQL+ KY+AK Q
Sbjct: 470  RMPLPLHSDPLQNELERIRKEIDQTIKIHEDTKQQLKSDCEKEIEEVVAQLRGKYDAKLQ 529

Query: 1557 DAEAAF 1574
            D EA F
Sbjct: 530  DVEATF 535


>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871447|gb|EEF08578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1441

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +3

Query: 1161 HPLVSADTPLSEQ-QPNLCSADRVDCQPLNPSQRPEAPPQVLEITTQVSSQAATLPGPHL 1337
            H L S D+P S Q   +      +D   +   Q   +  +   +T+++S+ +AT P   +
Sbjct: 1024 HLLPSIDSPTSSQLTTSFAQHVPIDLIAVGGPQTHISNMRTEPVTSRISNHSATAPAVRM 1083

Query: 1338 SNVQGSDNHIHWDSRTPPFSFDPLQAELEKLHELKDTVIKCHEAIKLKLKSDYEKELAEM 1517
                               S DPLQ EL+++    D +IK HE  KL+LKSD EKE+ E+
Sbjct: 1084 P---------------VSTSQDPLQNELDRIRTETDQIIKIHEDTKLRLKSDCEKEIQEV 1128

Query: 1518 IAQLKLKYEAKRQDAEAAF 1574
            +AQ++  Y+ K QD E  F
Sbjct: 1129 VAQIRRTYDFKLQDLEYEF 1147


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222837824|gb|EEE76189.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1996

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = +3

Query: 1299 VSSQAATLPGPHLSNVQGSDNHIHWDSRTP-PFSFDPLQAELEKLHELKDTVIKCHEAIK 1475
            +S+  A    P +SN  G+   +    R P   S DPLQ EL++L +  + +IK HE  K
Sbjct: 1646 ISNMRAAPVTPGISNRPGTALAV----RMPVSMSQDPLQNELDRLSKETEEIIKIHEDTK 1701

Query: 1476 LKLKSDYEKELAEMIAQLKLKYEAKRQDAEAAFQ 1577
            L+LKSD EKE+ E++AQ+  K++ K Q+ E+ FQ
Sbjct: 1702 LQLKSDCEKEIVEVVAQIHKKHDIKLQEIESDFQ 1735


>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
            mom(plant), putative [Ricinus communis]
          Length = 1982

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 51/178 (28%), Positives = 73/178 (41%), Gaps = 6/178 (3%)
 Frame = +3

Query: 1059 QTLPCDSGVSVHPAENHEKSSDHPSLQSRVNMEGHPLVSADTPLSEQQPNLCSADRVDCQ 1238
            Q  P +S +SV+       + D PS     +   H             P +   D+V C 
Sbjct: 1552 QMPPTESAISVN-------AMDLPSTSETQHQSNHEDFITCNIAGTSMPMV--EDQVQCS 1602

Query: 1239 PLNPSQRPEAPPQVLEITTQVSSQAATLPGPHLSNVQGSDNHIHWDSRTP------PFSF 1400
             L  SQ      Q L     V      +       +    N+    +  P      PF  
Sbjct: 1603 DLAISQHGTHTTQHLPADIPVHGSGTHVSDTRTLPISSGVNNYTVQTVPPVRVPPLPFYH 1662

Query: 1401 DPLQAELEKLHELKDTVIKCHEAIKLKLKSDYEKELAEMIAQLKLKYEAKRQDAEAAF 1574
            DPLQ ELE+L +  D ++  HE  KL+LKSD E+E    +AQ++ KYE K Q+ E+ F
Sbjct: 1663 DPLQVELERLRKEADQIVNAHENTKLQLKSDCEQE----VAQIRKKYEVKLQELESEF 1716


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 41/133 (30%), Positives = 68/133 (51%)
 Frame = +3

Query: 1176 ADTPLSEQQPNLCSADRVDCQPLNPSQRPEAPPQVLEITTQVSSQAATLPGPHLSNVQGS 1355
            +D P++E  P++ S+     QP   S    AP   + +    +  + T+  P  S +   
Sbjct: 1903 SDAPVTELLPSMDSS--AGSQPTT-SFAEHAPANSIAVGESGTRISNTMTAPVTSIISNC 1959

Query: 1356 DNHIHWDSRTPPFSFDPLQAELEKLHELKDTVIKCHEAIKLKLKSDYEKELAEMIAQLKL 1535
                         S DPLQ EL+++    + +IK HE  KL+LKSD EKE+ E++AQ++ 
Sbjct: 1960 PVTAPAVRMPVSMSQDPLQNELDRICRETEQIIKIHEDTKLQLKSDCEKEIQEVVAQIRT 2019

Query: 1536 KYEAKRQDAEAAF 1574
            K++ K Q+ E+ F
Sbjct: 2020 KHDIKLQEIESEF 2032


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