BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022698
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   350   3e-94
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              350   3e-94
ref|XP_002866485.1| pentatricopeptide repeat-containing protein ...   232   1e-58
ref|NP_201043.1| pentatricopeptide repeat-containing protein [Ar...   230   4e-58
ref|XP_002518061.1| pentatricopeptide repeat-containing protein,...   209   1e-51

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
            [Vitis vinifera]
          Length = 1101

 Score =  350 bits (898), Expect = 3e-94
 Identities = 173/306 (56%), Positives = 227/306 (74%)
 Frame = -3

Query: 920  LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
            LG RPLLS YNSLIK   QE  VE AK+L++LM++ G VPD  TYL+MV EHC  GDLAS
Sbjct: 508  LGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLAS 567

Query: 740  AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN 561
            AF +L QM+ER +KPSVAI+D +IGCL + KR+ +A ++FK +LE+GVDPD  +YV MI+
Sbjct: 568  AFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMIS 627

Query: 560  VYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMP 381
             YSKN +AIEA +LF++M +HG QP SH+Y+A+ISGLVK+NM++KG  Y++ M KDGF+P
Sbjct: 628  GYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVP 687

Query: 380  NKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNLQCYSGMWHD 201
            N VLYTSLI+ FLRKGELEFAFRLV LMDR+ IE D +T I L+SG+ RN+      W+ 
Sbjct: 688  NTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYH 747

Query: 200  AHTKSQKEREKLYRVLHQNTLLPKENDTRISITTHEDLKLLATKLMKGIKDTCNMPNLYL 21
              + S + RE L  +LHQ+ ++P+EN+      +   +K  A  LM+ IK +  MPNLYL
Sbjct: 748  VKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYL 807

Query: 20   YNGILS 3
            YNGI+S
Sbjct: 808  YNGIIS 813



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
 Frame = -3

Query: 908 PLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAFDV 729
           P   A N++++  C    V  A      + D+G +     +  ++   C +G +  AF +
Sbjct: 161 PCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYM 220

Query: 728 LRQMDERRMKPS-VAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYS 552
              M ER   P+ + ++  L   L +++RV +A     ++   G   D+ +Y  +I+ Y 
Sbjct: 221 FDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYC 280

Query: 551 KNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKV 372
           +  +   A R+F RM K G  PD++ Y+ LI G VK  + +KG      M + G  PN V
Sbjct: 281 RGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVV 340

Query: 371 LYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGI 240
            Y  +I  +  +G+++ A  L+S M   ++     +Y  LI+ +
Sbjct: 341 TYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITAL 384



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 35/265 (13%)
 Frame = -3

Query: 920  LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
            +G  P    YN+LI    + G  +    L   M + G  P+  TY +M+  +C+ G +  
Sbjct: 298  MGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDC 357

Query: 740  AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALY----- 576
            A  +L  M    + PSV  +  LI  L KE R+ +   ++KK+L+ GV PD  L+     
Sbjct: 358  ALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQ 417

Query: 575  -----------VRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMME 429
                       ++++   +KNG  ++   L    T    Q        L+  +V++N   
Sbjct: 418  KQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFAL 477

Query: 428  KGVQY--------------VASMFKD-----GFMPNKVLYTSLIDHFLRKGELEFAFRLV 306
              V +               A +F D     G  P    Y SLI    ++  +E A  L+
Sbjct: 478  ADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLI 537

Query: 305  SLMDRSHIEYDQVTYITLISGICRN 231
             LM  + I  D  TY+ ++   C +
Sbjct: 538  DLMQENGIVPDLATYLIMVHEHCNH 562



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
 Frame = -3

Query: 812 GTVPDSTTYLVMVSEHCKRGDLASA---FDVLRQMDERRMKPSVAIFDCLIGCLGKEKRV 642
           G +PDS T   MV  +C  G L  A   FD L ++D    KP+    + ++  L   +RV
Sbjct: 123 GIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPAC---NAMLRELCARERV 179

Query: 641 FDARSMFKKVLESGVDPDEALYVRMINVYSKNGQAIEANRLFNRMTKH-GMQPDSHAYSA 465
            +A   F ++ + G+      + R+I+     G   EA  +F+ M +  G+    H Y  
Sbjct: 180 LEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKT 239

Query: 464 LISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSH 285
           L  GL ++  +E+   +V  M  +G   +K++YTSLI  + R  ++  A R+   M +  
Sbjct: 240 LFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMG 299

Query: 284 IEYDQVTYITLISGICR 234
            + D  TY TLI G  +
Sbjct: 300 CDPDTYTYNTLIHGFVK 316



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/215 (23%), Positives = 94/215 (43%)
 Frame = -3

Query: 917 GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASA 738
           G    +  Y +L    C++  VE A+  V  ME  G   D   Y  ++  +C+   + +A
Sbjct: 229 GLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTA 288

Query: 737 FDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINV 558
             V  +M +    P    ++ LI    K         +  ++ E G+ P+   Y  MI  
Sbjct: 289 MRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRR 348

Query: 557 YSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPN 378
           Y + G+   A  L + M+   + P  H+Y+ LI+ L K+N + +  +    M   G +P+
Sbjct: 349 YCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPD 408

Query: 377 KVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYD 273
            VL+ +L+    +  EL  A +++  + ++    D
Sbjct: 409 HVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLD 443



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
 Frame = -3

Query: 917  GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSE---------- 768
            GF P    Y SLI    ++G +E A  LV+LM+      D  T + +VS           
Sbjct: 684  GFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRR 743

Query: 767  ---HCKRGD----------LASAFDVLRQMD-------ERRMK----------------P 696
               H K G           L  +F + R+ +        R++K                P
Sbjct: 744  RWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMP 803

Query: 695  SVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKNGQAIEANRLF 516
            ++ +++ +I    +   + DA + F+ +   GV P++  +  +IN +++ G+   A  LF
Sbjct: 804  NLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLF 863

Query: 515  NRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLIDHFLRK 336
            N+M   G+ PD   Y+ALI GL K   +   +    +M K G  PNK  Y  L+      
Sbjct: 864  NKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCAS 923

Query: 335  GELEFAFRLVSLMDRSHIEYDQV-TYITLISGICRNLQCYSGMWHDAH 195
                 AF++   M    + +D V  +      +C  + C    WH+AH
Sbjct: 924  HLGVHAFKIFEEM----LSHDYVPCWYNCNWLLC--ILCEEHRWHEAH 965



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 41/188 (21%), Positives = 88/188 (46%)
 Frame = -3

Query: 914  FRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAF 735
            F P L  YN +I   C+   ++ A    ELM+  G  P+  T+ ++++ H + G++  A 
Sbjct: 801  FMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAI 860

Query: 734  DVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVY 555
             +  +M+   + P    ++ LI  L K  R+ DA S+   + + G+ P+++ Y +++   
Sbjct: 861  GLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCL 920

Query: 554  SKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNK 375
              +   + A ++F  M  H   P  +  + L+  L +++   +       M K    P++
Sbjct: 921  CASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRKYPDE 980

Query: 374  VLYTSLID 351
            +    L++
Sbjct: 981  LTKRLLVE 988



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 1/219 (0%)
 Frame = -3

Query: 902 LSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDST-TYLVMVSEHCKRGDLASAFDVL 726
           L  +N LI   C +G V+ A  + + M +   +P +   Y  +    C++  +  A   +
Sbjct: 198 LWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFV 257

Query: 725 RQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKN 546
            +M+         ++  LI    + K++  A  +F ++L+ G DPD   Y  +I+ + K 
Sbjct: 258 GEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKL 317

Query: 545 GQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLY 366
           G   +   L N+M++ G+QP+   Y  +I    ++  ++  +  ++SM      P+   Y
Sbjct: 318 GLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSY 377

Query: 365 TSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLI 249
           T LI    ++  L     L   M    +  D V + TL+
Sbjct: 378 TVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLM 416


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  350 bits (898), Expect = 3e-94
 Identities = 173/306 (56%), Positives = 227/306 (74%)
 Frame = -3

Query: 920  LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
            LG RPLLS YNSLIK   QE  VE AK+L++LM++ G VPD  TYL+MV EHC  GDLAS
Sbjct: 388  LGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLAS 447

Query: 740  AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN 561
            AF +L QM+ER +KPSVAI+D +IGCL + KR+ +A ++FK +LE+GVDPD  +YV MI+
Sbjct: 448  AFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMIS 507

Query: 560  VYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMP 381
             YSKN +AIEA +LF++M +HG QP SH+Y+A+ISGLVK+NM++KG  Y++ M KDGF+P
Sbjct: 508  GYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVP 567

Query: 380  NKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNLQCYSGMWHD 201
            N VLYTSLI+ FLRKGELEFAFRLV LMDR+ IE D +T I L+SG+ RN+      W+ 
Sbjct: 568  NTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYH 627

Query: 200  AHTKSQKEREKLYRVLHQNTLLPKENDTRISITTHEDLKLLATKLMKGIKDTCNMPNLYL 21
              + S + RE L  +LHQ+ ++P+EN+      +   +K  A  LM+ IK +  MPNLYL
Sbjct: 628  VKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYL 687

Query: 20   YNGILS 3
            YNGI+S
Sbjct: 688  YNGIIS 693



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 35/265 (13%)
 Frame = -3

Query: 920 LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
           +G  P    YN+LI    + G  +    L   M + G  P+  TY +M+  +C+ G +  
Sbjct: 178 MGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDC 237

Query: 740 AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALY----- 576
           A  +L  M    + PSV  +  LI  L KE R+ +   ++KK+L+ GV PD  L+     
Sbjct: 238 ALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQ 297

Query: 575 -----------VRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMME 429
                      ++++   +KNG  ++   L    T    Q        L+  +V++N   
Sbjct: 298 KQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFAL 357

Query: 428 KGVQY--------------VASMFKD-----GFMPNKVLYTSLIDHFLRKGELEFAFRLV 306
             V +               A +F D     G  P    Y SLI    ++  +E A  L+
Sbjct: 358 ADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLI 417

Query: 305 SLMDRSHIEYDQVTYITLISGICRN 231
            LM  + I  D  TY+ ++   C +
Sbjct: 418 DLMQENGIVPDLATYLIMVHEHCNH 442



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
 Frame = -3

Query: 917  GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASA 738
            GF+P   +Y ++I    +E  ++   + +  M   G VP++  Y  ++++  ++G+L  A
Sbjct: 529  GFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFA 588

Query: 737  FDVLRQMDERRMKPSVAIFDCLIGCLGKE-----KRVFDARSMFKKVLESGVDPDEALYV 573
            F ++  MD  +++  +     L+  + +      +R +  +S   +V E  +      +V
Sbjct: 589  FRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFV 648

Query: 572  --RMINVYSKNGQAIE----ANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYV 411
              R  N+    G   +    A  L  ++      P+ + Y+ +ISG  + NM++    + 
Sbjct: 649  IPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHF 708

Query: 410  ASMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICR 234
              M  +G  PN+V +T LI+   R GE++ A  L + M+   +  D +TY  LI G+C+
Sbjct: 709  ELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCK 767



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = -3

Query: 764 CKRGDLASAFDVLRQMDERRMKPS-VAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPD 588
           C +G +  AF +   M ER   P+ + ++  L   L +++RV +A     ++   G   D
Sbjct: 89  CDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFID 148

Query: 587 EALYVRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVA 408
           + +Y  +I+ Y +  +   A R+F RM K G  PD++ Y+ LI G VK  + +KG     
Sbjct: 149 KMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHN 208

Query: 407 SMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGI 240
            M + G  PN V Y  +I  +  +G+++ A  L+S M   ++     +Y  LI+ +
Sbjct: 209 QMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITAL 264



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/215 (23%), Positives = 94/215 (43%)
 Frame = -3

Query: 917 GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASA 738
           G    +  Y +L    C++  VE A+  V  ME  G   D   Y  ++  +C+   + +A
Sbjct: 109 GLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTA 168

Query: 737 FDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINV 558
             V  +M +    P    ++ LI    K         +  ++ E G+ P+   Y  MI  
Sbjct: 169 MRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRR 228

Query: 557 YSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPN 378
           Y + G+   A  L + M+   + P  H+Y+ LI+ L K+N + +  +    M   G +P+
Sbjct: 229 YCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPD 288

Query: 377 KVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYD 273
            VL+ +L+    +  EL  A +++  + ++    D
Sbjct: 289 HVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLD 323



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
 Frame = -3

Query: 917  GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSE---------- 768
            GF P    Y SLI    ++G +E A  LV+LM+      D  T + +VS           
Sbjct: 564  GFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRR 623

Query: 767  ---HCKRGD----------LASAFDVLRQMD-------ERRMK----------------P 696
               H K G           L  +F + R+ +        R++K                P
Sbjct: 624  RWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMP 683

Query: 695  SVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKNGQAIEANRLF 516
            ++ +++ +I    +   + DA + F+ +   GV P++  +  +IN +++ G+   A  LF
Sbjct: 684  NLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLF 743

Query: 515  NRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLI 354
            N+M   G+ PD   Y+ALI GL K   +   +    +M K G  PNK  Y  L+
Sbjct: 744  NKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLL 797



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
 Frame = -3

Query: 905 LLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDST-TYLVMVSEHCKRGDLASAFDV 729
           +L+    LI   C +G V+ A  + + M +   +P +   Y  +    C++  +  A   
Sbjct: 77  ILAVDKRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELF 136

Query: 728 LRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSK 549
           + +M+         ++  LI    + K++  A  +F ++L+ G DPD   Y  +I+ + K
Sbjct: 137 VGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVK 196

Query: 548 NGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVL 369
            G   +   L N+M++ G+QP+   Y  +I    ++  ++  +  ++SM      P+   
Sbjct: 197 LGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHS 256

Query: 368 YTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLI 249
           YT LI    ++  L     L   M    +  D V + TL+
Sbjct: 257 YTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLM 296


>ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312320|gb|EFH42744.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 983

 Score =  232 bits (591), Expect = 1e-58
 Identities = 127/311 (40%), Positives = 191/311 (61%), Gaps = 5/311 (1%)
 Frame = -3

Query: 920  LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
            LG  PL  +YNS+IK   QE  +E   +LV L++++  VPD  TYL++V+E CK  D  +
Sbjct: 507  LGCTPLPFSYNSVIKCLFQENIIEDLGSLVNLIQELDFVPDVDTYLIVVNELCKNNDRDA 566

Query: 740  AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN 561
            AF V+  M+E  ++P+VAI+  +IG LGK+ RV +A   F K+LESG+ PDE  Y+ MIN
Sbjct: 567  AFSVIDVMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 626

Query: 560  VYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMP 381
             Y++NG+  EAN L   + KH ++P S  Y+ LISG VK  MMEKG QY+  M +DG  P
Sbjct: 627  AYARNGRIDEANELVEEVVKHFVRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 686

Query: 380  NKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNLQCYSGMWHD 201
            N VLYTSLI HFL+KG+ +F+F L  LM  + I++D + YITL+SG+ R +         
Sbjct: 687  NAVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSGLWRAM--------- 737

Query: 200  AHTKSQKEREKLYRVLHQNTLLPKENDTRISITTHEDL-----KLLATKLMKGIKDTCNM 36
                ++K++ ++     +  LL +   T+  ++    L     K  A +++  +K +  +
Sbjct: 738  ----ARKKKRQVIVEPGKEKLLQRLLQTKPIVSISSSLCNYGSKSFAMEVIGKVKKSI-I 792

Query: 35   PNLYLYNGILS 3
            PNLYL+N I++
Sbjct: 793  PNLYLHNTIVT 803



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
 Frame = -3

Query: 902 LSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAFDVLR 723
           ++ Y SL    C+ G    A+AL + ME  G   D   Y  ++ E+CK  ++  A  +  
Sbjct: 238 VNLYKSLFYCFCRRGCAAEAEALFDHMEVDGYFVDKVMYTCLMREYCKDNNMTMAMRLYL 297

Query: 722 QMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKNG 543
           +M ER  +    IF+ LI    K   +   R MF ++++ GV  +   Y  MI  Y K G
Sbjct: 298 RMVERSCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGVQSNVFTYHVMIGSYCKEG 357

Query: 542 QAIEANRLFNRMTK-HGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLY 366
               A RLF   T    +  + H Y+ LISG  KK  M+K V  +  M  +G +P+ + Y
Sbjct: 358 NVDYALRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 417

Query: 365 TSLIDHFLRKGELEFAFRLV-SLMD 294
             L+    +  EL++A  ++ S++D
Sbjct: 418 FVLLKMLPKCHELKYAMVILQSILD 442



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
 Frame = -3

Query: 917  GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASA 738
            G +P   AY  +I +  + G ++ A  LVE +      P S TY V++S   K G +   
Sbjct: 613  GIQPDEIAYMIMINAYARNGRIDEANELVEEVVKHFVRPSSFTYTVLISGFVKMGMMEKG 672

Query: 737  FDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN- 561
               L +M E  + P+  ++  LIG   K+     + ++F  + E+G+  D   Y+ +++ 
Sbjct: 673  CQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSG 732

Query: 560  -----VYSKNGQAIEA---NRLFNRM----------------------------TKHGMQ 489
                    K  Q I      +L  R+                             K  + 
Sbjct: 733  LWRAMARKKKRQVIVEPGKEKLLQRLLQTKPIVSISSSLCNYGSKSFAMEVIGKVKKSII 792

Query: 488  PDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRL 309
            P+ + ++ +++G      +++   ++ SM K+G +PN+V YT L+   +  G++E A   
Sbjct: 793  PNLYLHNTIVTGYCAAGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESA--- 849

Query: 308  VSLMDRSHIEYDQVTYITLISGICRN 231
            + L + +  E DQV   TL+ G+C +
Sbjct: 850  IDLFEETKCEPDQVMCSTLLKGLCES 875



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
 Frame = -3

Query: 764 CKRGDLASAFDVLRQMDER-RMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPD 588
           C  G L  A  +L  + E  RM   V ++  L  C  +     +A ++F  +   G   D
Sbjct: 213 CGHGHLDEAIGMLDTLCEMTRMPLPVNLYKSLFYCFCRRGCAAEAEALFDHMEVDGYFVD 272

Query: 587 EALYVRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVA 408
           + +Y  ++  Y K+     A RL+ RM +   + D   ++ LI G +K  M++KG    +
Sbjct: 273 KVMYTCLMREYCKDNNMTMAMRLYLRMVERSCELDPCIFNTLIHGFMKLGMLDKGRVMFS 332

Query: 407 SMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNL 228
            M K G   N   Y  +I  + ++G +++A RL                 T +  I RN+
Sbjct: 333 QMIKRGVQSNVFTYHVMIGSYCKEGNVDYALRLFE-------------NNTGVEDISRNV 379

Query: 227 QCYSGMWHDAHTKS--QKEREKLYRVLHQNTLLP 132
            CY+ +    + K    K  + L R+L  N ++P
Sbjct: 380 HCYTTLISGFYKKGGMDKAVDLLMRML-DNGIVP 412



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/173 (23%), Positives = 85/173 (49%)
 Frame = -3

Query: 908  PLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAFDV 729
            P L  +N+++   C  G ++ A   +E M+  G VP+  TY +++  H + GD+ SA D+
Sbjct: 793  PNLYLHNTIVTGYCAAGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAIDL 852

Query: 728  LRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSK 549
                +E + +P   +   L+  L + +R  DA ++  ++ + G+ P++  Y +++     
Sbjct: 853  ---FEETKCEPDQVMCSTLLKGLCESERPLDALALMLEMQKKGIYPNKDSYEKLLQCLCY 909

Query: 548  NGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDG 390
            +   +EA ++   M    + P S  ++ LI  L ++  + +     A M + G
Sbjct: 910  SRLTMEAFKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 962


>ref|NP_201043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75180621|sp|Q9LVA2.1|PP443_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g62370 gi|8809650|dbj|BAA97201.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332010218|gb|AED97601.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 982

 Score =  230 bits (586), Expect = 4e-58
 Identities = 124/311 (39%), Positives = 192/311 (61%), Gaps = 5/311 (1%)
 Frame = -3

Query: 920  LGFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLAS 741
            LG  PL  +YNS+IK   QE  +E   +LV +++++  VPD  TYL++V+E CK+ D  +
Sbjct: 506  LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDA 565

Query: 740  AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN 561
            AF ++  M+E  ++P+VAI+  +IG LGK+ RV +A   F K+LESG+ PDE  Y+ MIN
Sbjct: 566  AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625

Query: 560  VYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMP 381
             Y++NG+  EAN L   + KH ++P S  Y+ LISG VK  MMEKG QY+  M +DG  P
Sbjct: 626  TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685

Query: 380  NKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNLQCYSGMWHD 201
            N VLYT+LI HFL+KG+ +F+F L  LM  + I++D + YITL+SG+ R +         
Sbjct: 686  NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAM--------- 736

Query: 200  AHTKSQKEREKLYRVLHQNTLLPKENDTRISITTHEDL-----KLLATKLMKGIKDTCNM 36
                ++K++ ++     +  LL +   T+  ++    L     K  A +++  +K +  +
Sbjct: 737  ----ARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI-I 791

Query: 35   PNLYLYNGILS 3
            PNLYL+N I++
Sbjct: 792  PNLYLHNTIIT 802



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
 Frame = -3

Query: 902 LSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAFDVLR 723
           ++ Y SL    C+ G    A+AL + ME  G   D   Y  ++ E+CK  ++  A  +  
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296

Query: 722 QMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKNG 543
           +M ER  +    IF+ LI    K   +   R MF ++++ GV  +   Y  MI  Y K G
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356

Query: 542 QAIEANRLF-NRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLY 366
               A RLF N      +  + H Y+ LI G  KK  M+K V  +  M  +G +P+ + Y
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416

Query: 365 TSLIDHFLRKGELEFAFRLV-SLMD 294
             L+    +  EL++A  ++ S++D
Sbjct: 417 FVLLKMLPKCHELKYAMVILQSILD 441



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
 Frame = -3

Query: 917  GFRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASA 738
            G +P   AY  +I +  + G ++ A  LVE +      P S TY V++S   K G +   
Sbjct: 612  GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671

Query: 737  FDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN- 561
               L +M E  + P+V ++  LIG   K+     + ++F  + E+ +  D   Y+ +++ 
Sbjct: 672  CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG 731

Query: 560  -----VYSKNGQAIEA---NRLFNRM----------------------------TKHGMQ 489
                    K  Q I      +L  R+                             K  + 
Sbjct: 732  LWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII 791

Query: 488  PDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRL 309
            P+ + ++ +I+G      +++   ++ SM K+G +PN V YT L+   +  G++E A   
Sbjct: 792  PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA--- 848

Query: 308  VSLMDRSHIEYDQVTYITLISGIC 237
            + L + ++ E DQV Y TL+ G+C
Sbjct: 849  IDLFEGTNCEPDQVMYSTLLKGLC 872



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
 Frame = -3

Query: 764 CKRGDLASAFDVLRQM-DERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPD 588
           C  G L  A  +L  +    RM   V ++  L  C  K     +A ++F  +   G   D
Sbjct: 212 CGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVD 271

Query: 587 EALYVRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVA 408
           + +Y  ++  Y K+     A RL+ RM +   + D   ++ LI G +K  M++KG    +
Sbjct: 272 KVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFS 331

Query: 407 SMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICRNL 228
            M K G   N   Y  +I  + ++G +++A RL                 T    I RN+
Sbjct: 332 QMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL-------------FVNNTGSEDISRNV 378

Query: 227 QCYSGMWHDAHTKS--QKEREKLYRVLHQNTLLP 132
            CY+ +    + K    K  + L R+L  N ++P
Sbjct: 379 HCYTNLIFGFYKKGGMDKAVDLLMRML-DNGIVP 411



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 42/173 (24%), Positives = 85/173 (49%)
 Frame = -3

Query: 908  PLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAFDV 729
            P L  +N++I   C  G ++ A   +E M+  G VP+  TY +++  H + GD+ SA D+
Sbjct: 792  PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851

Query: 728  LRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSK 549
                +    +P   ++  L+  L   KR  DA ++  ++ +SG++P++  Y +++     
Sbjct: 852  ---FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908

Query: 548  NGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDG 390
            +   +EA ++   M    + P S  ++ LI  L ++  + +     A M + G
Sbjct: 909  SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
 Frame = -3

Query: 884 LIKSSCQEGFVEHAKALVELMEDMGTVP-DSTTYLVMVSEHCKRGDLASAFDVLRQMDER 708
           L K  C  G +  A  +++ +  M  +P     Y  +    CKRG  A A  +   M+  
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266

Query: 707 RMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVYSKNGQAIEA 528
                  ++ CL+    K+  +  A  ++ +++E   + D  ++  +I+ + K G   + 
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326

Query: 527 NRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQ-YVASMFKDGFMPNKVLYTSLID 351
             +F++M K G+Q +   Y  +I    K+  ++  ++ +V +   +    N   YT+LI 
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386

Query: 350 HFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLI 249
            F +KG ++ A  L+  M  + I  D +TY  L+
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420


>ref|XP_002518061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542657|gb|EEF44194.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  209 bits (531), Expect = 1e-51
 Identities = 107/214 (50%), Positives = 145/214 (67%)
 Frame = -3

Query: 644 VFDARSMFKKVLESGVDPDEALYVRMINVYSKNGQAIEANRLFNRMTKHGMQPDSHAYSA 465
           +F+A ++F+++L++GV PDE +YV MIN Y ++G+ +EA++LF +M ++   P   +Y+A
Sbjct: 1   MFEAETLFQRMLKAGVHPDETVYVTMINGYFRSGRILEAHQLFEKMIQYAFPPSLDSYTA 60

Query: 464 LISGLVKKNMMEKGVQYVASMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSH 285
           LISGLVK N +EKG  Y+  M +DGF+PN V+Y SLI HFLRKG LEFAFRL  LMDRS 
Sbjct: 61  LISGLVKNNEIEKGCVYLDRMLRDGFVPNAVIYASLICHFLRKGHLEFAFRLFDLMDRSL 120

Query: 284 IEYDQVTYITLISGICRNLQCYSGMWHDAHTKSQKEREKLYRVLHQNTLLPKENDTRISI 105
           IE D V YI L+ G CRN+             S++ RE+L ++L Q   LPK+N  R S 
Sbjct: 121 IEIDLVMYIALVIGFCRNINGVKQKLCQVTGASERMRERLLQLLCQGNFLPKKNILRFSA 180

Query: 104 TTHEDLKLLATKLMKGIKDTCNMPNLYLYNGILS 3
            + E +K  A KLM  IK T  MPNLYLYNGI++
Sbjct: 181 NSPEAMKFFAFKLMYKIKGTRFMPNLYLYNGIIA 214



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 11/238 (4%)
 Frame = -3

Query: 914 FRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAF 735
           F P L +Y +LI    +   +E     ++ M   G VP++  Y  ++    ++G L  AF
Sbjct: 51  FPPSLDSYTALISGLVKNNEIEKGCVYLDRMLRDGFVPNAVIYASLICHFLRKGHLEFAF 110

Query: 734 DVLRQMDERRMKPSVAIFDCLI--------GCLGKEKRVFDARSMFKKVLESGVDPDEAL 579
            +   MD   ++  + ++  L+        G   K  +V  A    ++ L   +     L
Sbjct: 111 RLFDLMDRSLIEIDLVMYIALVIGFCRNINGVKQKLCQVTGASERMRERLLQLLCQGNFL 170

Query: 578 YVRMINVYSKNG-QAIE--ANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVA 408
             + I  +S N  +A++  A +L  ++      P+ + Y+ +I+G    + ++       
Sbjct: 171 PKKNILRFSANSPEAMKFFAFKLMYKIKGTRFMPNLYLYNGIIAGFCWADRIKDAYIQFE 230

Query: 407 SMFKDGFMPNKVLYTSLIDHFLRKGELEFAFRLVSLMDRSHIEYDQVTYITLISGICR 234
            M  +G  PN+V +T LI    R GE++ A  L +LM+ +    D+VTY TL+ G+C+
Sbjct: 231 KMQSEGLCPNEVTFTILIGAHCRAGEIDHAIELFNLMNANAYSPDKVTYSTLLKGLCK 288



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 40/152 (26%), Positives = 69/152 (45%)
 Frame = -3

Query: 914 FRPLLSAYNSLIKSSCQEGFVEHAKALVELMEDMGTVPDSTTYLVMVSEHCKRGDLASAF 735
           F P L  YN +I   C    ++ A    E M+  G  P+  T+ +++  HC+ G++  A 
Sbjct: 202 FMPNLYLYNGIIAGFCWADRIKDAYIQFEKMQSEGLCPNEVTFTILIGAHCRAGEIDHAI 261

Query: 734 DVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMINVY 555
           ++   M+     P    +  L+  L K  R  DA S+F  + + G  P++A Y  +I ++
Sbjct: 262 ELFNLMNANAYSPDKVTYSTLLKGLCKASREIDALSLFFTMHKRGFFPNKASYENLIRLF 321

Query: 554 SKNGQAIEANRLFNRMTKHGMQPDSHAYSALI 459
                +I A +LF  M  H   P  +    L+
Sbjct: 322 CARHLSIPAFKLFEEMLAHNYLPRQYTAEWLL 353



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 43/148 (29%), Positives = 71/148 (47%)
 Frame = -3

Query: 740 AFDVLRQMDERRMKPSVAIFDCLIGCLGKEKRVFDARSMFKKVLESGVDPDEALYVRMIN 561
           AF ++ ++   R  P++ +++ +I       R+ DA   F+K+   G+ P+E  +  +I 
Sbjct: 190 AFKLMYKIKGTRFMPNLYLYNGIIAGFCWADRIKDAYIQFEKMQSEGLCPNEVTFTILIG 249

Query: 560 VYSKNGQAIEANRLFNRMTKHGMQPDSHAYSALISGLVKKNMMEKGVQYVASMFKDGFMP 381
            + + G+   A  LFN M  +   PD   YS L+ GL K +     +    +M K GF P
Sbjct: 250 AHCRAGEIDHAIELFNLMNANAYSPDKVTYSTLLKGLCKASREIDALSLFFTMHKRGFFP 309

Query: 380 NKVLYTSLIDHFLRKGELEFAFRLVSLM 297
           NK  Y +LI  F  +     AF+L   M
Sbjct: 310 NKASYENLIRLFCARHLSIPAFKLFEEM 337