BLASTX nr result

ID: Atractylodes22_contig00022670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022670
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    88   6e-16
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    86   3e-15
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    85   5e-15
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    81   8e-14
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    80   2e-13

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/108 (38%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = +3

Query: 168 GIRHLTRDEWEDRRRRGLCFGCGHKYSPQ-HKCSEGTMRVLLLADGEVLDEEGEIRVIEA 344
           G+R +  +E  +RR +GLCF CG KY P  HKC E  +RVL+L +GE L++EGEI  +EA
Sbjct: 298 GVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAMEA 357

Query: 345 -EKEAETDVDGECHALEFFGHIPDTKFPPNTIRLAGNIKDIPILVLVD 485
            + ++E +++ EC ++   G + + +    T+++ G I+++ +LVL+D
Sbjct: 358 VQPDSEEEIEVECKSMGVLGSMGEHR----TMKIEGKIENVDVLVLID 401


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/110 (39%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
 Frame = +3

Query: 168  GIRHLTRDEWEDRRRRGLCFGCGHKYSPQ-HKCSEGTMRVLLLADGEVLDEEGEIRVIEA 344
            G+R +   E  +RR +GLCF CG KY P  HKC E ++RVL+L +GE ++EEGEI  +E 
Sbjct: 923  GVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLET 982

Query: 345  E---KEAETDVDGECHALEFFGHIPDTKFPPNTIRLAGNIKDIPILVLVD 485
            +   +E E +++ EC  +   G + +     NT+++ G +++I ++VLVD
Sbjct: 983  QEVLEEEEEEIESECKVIGVLGSMGEY----NTMKIGGKLENIDVVVLVD 1028


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
 Frame = +3

Query: 168 GIRHLTRDEWEDRRRRGLCFGCGHKYSPQ-HKCSEGTMRVLLLADGEVLDEEGEI-RVIE 341
           GIR +  +E+E+RR +GLCF CG KY P  HKC E  +RVL+L +GE + +EGEI  + +
Sbjct: 314 GIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVSMKD 373

Query: 342 AEKEAETDVDGECHALEFFGHIPDTKFPPNTIRLAGNIKDIPILVLVD 485
              E+E +V+ EC  +   G + ++    +T+R+ G I ++ +LVL+D
Sbjct: 374 VTVESEEEVEVECKLMGVLGSMGES----HTMRVEGKIHNVDLLVLID 417


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/103 (39%), Positives = 68/103 (66%)
 Frame = +3

Query: 177 HLTRDEWEDRRRRGLCFGCGHKYSPQHKCSEGTMRVLLLADGEVLDEEGEIRVIEAEKEA 356
           HL+ +E  +R+++GLCF CG  + P H+C +  +RVL+L + E  + EG++  +E + E 
Sbjct: 98  HLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAVEVDDEE 157

Query: 357 ETDVDGECHALEFFGHIPDTKFPPNTIRLAGNIKDIPILVLVD 485
           E   DGE   +EFF H+  ++  P +I+L G IK++P++VLVD
Sbjct: 158 EG--DGEMCMMEFF-HLGHSR--PQSIKLMGVIKEVPVVVLVD 195


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = +3

Query: 201 DRRRRGLCFGCGHKYSPQ-HKCSEGTMRVLLLADGEVLDEEGEIRVIEAE---KEAETDV 368
           +RR +GLCF CG KY P  HKC E ++RVL+L +GE ++EEGEI  +E +   +E E ++
Sbjct: 3   ERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEI 62

Query: 369 DGECHALEFFGHIPDTKFPPNTIRLAGNIKDIPILVLVD 485
           + EC  +   G + +     NT+++ G +++I ++VLVD
Sbjct: 63  ESECKVIGVLGSMGEY----NTMKIGGKLENIDVVVLVD 97


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