BLASTX nr result

ID: Atractylodes22_contig00022641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022641
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago trunc...   130   8e-29
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   130   1e-28
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   130   1e-28
gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]                  129   2e-28
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   125   5e-27

>ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago truncatula]
           gi|355492909|gb|AES74112.1| RING-H2 finger protein ATL1B
           [Medicago truncatula]
          Length = 193

 Score =  130 bits (328), Expect = 8e-29
 Identities = 74/157 (47%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
 Frame = -1

Query: 457 MSHRFRILGGLYSPTATPPEPSPDDFIDSNPEFILFIVIAVILCFILSLLVLNVVARCSW 278
           M+  FR LG L S ++  PE S    +DS+      +++A +LC ++ +L L  V RC  
Sbjct: 1   MTRPFRFLGELNSSSSDSPESST--VVDSD----FVVILAALLCALICVLGLVAVTRCGC 54

Query: 277 IRWFPNTVITSRIDHFSLPAA-------KLLRRIPKLTYTTESMADKFSDCAICLTEFVV 119
           +R    +  T+     + PAA       K+LR +PKLT T ES A KFSDCAICL+EF  
Sbjct: 55  LRRLRLSSTTNNTSPAAPPAAANKGVKKKVLRSLPKLTATEES-AVKFSDCAICLSEFTA 113

Query: 118 GDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLL 8
           GDEIRVLP+CGH FHV CID W+ SH +CPSCRQ+L+
Sbjct: 114 GDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILV 150


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
 Frame = -1

Query: 457 MSHRFRILGGLYSPTATPPEPSPDDFIDSNPEFILFIVIAVILCFILSLLVLNVVARCSW 278
           M+H  R LGG+ S      E +  D      +F+  +++A +LC ++ +L L  VARC+W
Sbjct: 1   MTHPSRFLGGVNSSATASQESAAVD-----SDFV--VILAALLCALICVLGLVAVARCAW 53

Query: 277 IRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLTYTTESMADKFSDCAICLTEFVVGD 113
           +R                PA      K+LR +PK+TY  E+ A   +DCAICLTEFV GD
Sbjct: 54  LRRISGAANLPGGSAPQTPANKGLKKKILRSLPKVTYAAET-AGNLTDCAICLTEFVGGD 112

Query: 112 EIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLL 8
           EIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+
Sbjct: 113 EIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILV 147


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
 Frame = -1

Query: 457 MSHRFRILGGLYSPTATPPEPSPDDFIDSNPEFILFIVIAVILCFILSLLVLNVVARCSW 278
           M+H  R LGG+ S      E +  D      +F+  +++A +LC ++ +L L  VARC+W
Sbjct: 1   MTHPSRFLGGVNSSATASQESAAVD-----SDFV--VILAALLCALICVLGLVAVARCAW 53

Query: 277 IRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLTYTTESMADKFSDCAICLTEFVVGD 113
           +R                PA      K+LR +PK+TY  E+ A   +DCAICLTEFV GD
Sbjct: 54  LRRISGAANLPGGSAPQTPANKGLKKKILRSLPKVTYAAET-AGNLTDCAICLTEFVGGD 112

Query: 112 EIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLL 8
           EIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+
Sbjct: 113 EIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILV 147


>gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
          Length = 197

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/149 (46%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
 Frame = -1

Query: 433 GGLYSPTATPPEPSPDDFIDSNPEFILFIVIAVILCFILSLLVLNVVARCSWIRWFPNTV 254
           GG   P++TP           + +F+  +V+A +LC ++ +L L  VARC+WIR    + 
Sbjct: 11  GGHLKPSSTPSPAGDSTTRRVDSDFV--VVLAALLCALICVLGLVAVARCNWIRRISGS- 67

Query: 253 ITSRIDHFSLPA-----AKLLRRIPKLTYTTESMADKFSDCAICLTEFVVGDEIRVLPRC 89
           I       S PA      K+L+ +PK  Y  E  ADKFS+CAICL EF VG+EIRVLP+C
Sbjct: 68  IAGNSAFASAPANKGLKKKVLKSLPKFNYGAEH-ADKFSECAICLAEFAVGEEIRVLPQC 126

Query: 88  GHCFHVVCIDRWIGSHFTCPSCRQMLLKT 2
           GH FHV CID W+GSH +CPSCR +L+ T
Sbjct: 127 GHGFHVGCIDTWLGSHSSCPSCRSILVVT 155


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/145 (44%), Positives = 93/145 (64%), Gaps = 7/145 (4%)
 Frame = -1

Query: 415 TATPPEPSPDDFIDSNPEFILFIVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRID 236
           + +P E SP    D      L +++AV+LC +  ++ L  V+RC+W+R   +   + +  
Sbjct: 14  STSPAEASPPFNSD------LVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTH 67

Query: 235 HFSLPAA------KLLRRIPKLTYTTESM-ADKFSDCAICLTEFVVGDEIRVLPRCGHCF 77
              + AA      K+LR +PKLTY+ +S  A+K  +CAICLTEF  GDE+RVLP+CGH F
Sbjct: 68  PPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGF 127

Query: 76  HVVCIDRWIGSHFTCPSCRQMLLKT 2
           HV CID W+GSH +CPSCRQ+L+ T
Sbjct: 128 HVSCIDTWLGSHSSCPSCRQILVVT 152


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