BLASTX nr result

ID: Atractylodes22_contig00022630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022630
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254...   333   6e-89
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...   296   1e-77
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]   296   1e-77
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ...   291   2e-76
emb|CBI31378.3| unnamed protein product [Vitis vinifera]              288   3e-75

>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
          Length = 1395

 Score =  333 bits (855), Expect = 6e-89
 Identities = 186/405 (45%), Positives = 253/405 (62%), Gaps = 5/405 (1%)
 Frame = +3

Query: 204  KQKMMNRFHKHNXXXXXXVDFKSGERLDFKFSSLQALQVPTGWDKLSISLISVETDKTVS 383
            K++ M R H+H          KSG R  F FS  QALQVP GWDKL +S+ISVET +T +
Sbjct: 12   KRRKMFRLHRHKPD-------KSGHRFHFNFSGFQALQVPKGWDKLCVSIISVETGRTTT 64

Query: 384  KTGKATVYNGNCRWTETLSESIWVSPDDASKELQQCLYKLLISKASTRSGILGEVTVNLS 563
            KTGK++V  GNCRWTETLS+SIW+  DDASKE+++CL+KL+++  S+RSGILGE TVNL+
Sbjct: 65   KTGKSSVRTGNCRWTETLSDSIWIPQDDASKEVEECLFKLVVAMGSSRSGILGEATVNLA 124

Query: 564  SYLSSETSLPVALPLKKCNHGTILQVAIQCLTPQANLRWRDTNSLTEDVNSDYSDLDNMS 743
             Y+SS+ S  ++LPL+KC+HGT LQ            +W++TNS  ED +++Y DL+N+S
Sbjct: 125  GYVSSKASFLLSLPLEKCHHGTTLQ------------QWQNTNSHVEDSSAEYDDLENIS 172

Query: 744  DAPYGKNIKNVGSSMSNSILDTSHARGLGSRETSLSTGRSHHSFYSMDDSFGRE--SSRS 917
            D       +++GSS SN    T H    G ++TS S   SH SF SM+ S GRE  S ++
Sbjct: 173  DVSDSTFTRSIGSSSSNQFDSTYHPGETGGKDTSRSASGSHRSFDSMEGSLGRENLSPQN 232

Query: 918  NLSEVAIDLIGRPEXXXXXXXXXXXXXNVYDSPRSNRSPFS---LSSGKNIINRRHDSEK 1088
              + V  DLIG+ +                D  RSNRS F+    SSG ++ N+R D  +
Sbjct: 233  PFTGVMNDLIGKQDSTSSNSSSLFGSYPANDISRSNRSSFNSKVSSSGSHLQNQRDDFGR 292

Query: 1089 VSHTVPASPLRTFDSSDFVLEAEGATPEELRAEARTWERKARKLVVDFDLSRKETSDQTK 1268
            VSH +  SPLR   S   +  AEGA  EELRAEAR WE+ ARKL+ D ++ RKE S+Q+K
Sbjct: 293  VSHAIATSPLRNAGSCKDLEAAEGAF-EELRAEARMWEQNARKLMHDLEILRKEFSNQSK 351

Query: 1269 NLENVSMELFGLQTECEGLKHENKHLKNILGESAVKVRDADNLKV 1403
            N  ++ MEL    TEC  L+ E + L  +L E  V+ +D +NLK+
Sbjct: 352  NQADLDMELAASHTECNRLRQEIEQLNFLLEELTVRQKDTENLKL 396


>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score =  296 bits (758), Expect = 1e-77
 Identities = 176/379 (46%), Positives = 232/379 (61%), Gaps = 9/379 (2%)
 Frame = +3

Query: 267  KSGERLDFKFSSLQALQVPTGWDKLSISLISVETDKTVSKTGKATVYNGNCRWTETLSES 446
            KSGER+DFKFS+ QA QVP GWDKL +S++SVET K+++K+ KA+  NGNC+WTETLSES
Sbjct: 11   KSGERVDFKFSNFQATQVPKGWDKLFVSIVSVETGKSIAKSSKASARNGNCQWTETLSES 70

Query: 447  IWVSPDDASKELQQCLYKLLISKASTRSGILGEVTVNLSSYLSSETSLPVALPLKKCNHG 626
            IW+S +D SK+L++ L+K +++  S R+GILGE T+N++SY+SS  S+ V+LPLKKCNHG
Sbjct: 71   IWISQEDNSKDLEEFLFKFVVAMGSARTGILGEATINMASYMSSSASVSVSLPLKKCNHG 130

Query: 627  TILQVAIQCLTPQANLR---WRDTNSLTEDVNSDYSDLDNMSDAPYGKNIKNVGSSMSNS 797
            TILQV I CLTP+   R    +DTNS  ED   D  D D   D       KN GSS S  
Sbjct: 131  TILQVKIHCLTPRIKQRDEESKDTNSHEEDPKVDNHDTDIKLDGS-DNAAKNGGSSSSKD 189

Query: 798  ILDTSHARGLGSRETSLSTGRSHHSFYSMDDSF--GRESSRSNLSEVAIDLIGRPEXXXX 971
            +  TSH   LGSRETS ST  S+HSF S       G  SS +N++       GR +    
Sbjct: 190  LEPTSHPGELGSRETSFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSS 249

Query: 972  XXXXXXXXXNVYDSPRSNRSPFS---LSSGKNIINRRHD-SEKVSHTVPASPLRTFDSSD 1139
                        D P+S  S F+   + SG    N   D +   S+ + +S L    SS 
Sbjct: 250  QTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSK 309

Query: 1140 FVLEAEGATPEELRAEARTWERKARKLVVDFDLSRKETSDQTKNLENVSMELFGLQTECE 1319
             +LEA   T EELRAEA+ WER ++KL++D ++ RKE SDQ+KN   + MEL    +E +
Sbjct: 310  NLLEAAEDTIEELRAEAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERD 369

Query: 1320 GLKHENKHLKNILGESAVK 1376
             LK E   LK +L ES +K
Sbjct: 370  ALKKEIDQLKILLEESKMK 388


>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
          Length = 2427

 Score =  296 bits (758), Expect = 1e-77
 Identities = 176/379 (46%), Positives = 232/379 (61%), Gaps = 9/379 (2%)
 Frame = +3

Query: 267  KSGERLDFKFSSLQALQVPTGWDKLSISLISVETDKTVSKTGKATVYNGNCRWTETLSES 446
            KSGER+DFKFS+ QA QVP GWDKL +S++SVET K+++K+ KA+  NGNC+WTETLSES
Sbjct: 11   KSGERVDFKFSNFQATQVPKGWDKLFVSIVSVETGKSIAKSSKASARNGNCQWTETLSES 70

Query: 447  IWVSPDDASKELQQCLYKLLISKASTRSGILGEVTVNLSSYLSSETSLPVALPLKKCNHG 626
            IW+S +D SK+L++ L+K +++  S R+GILGE T+N++SY+SS  S+ V+LPLKKCNHG
Sbjct: 71   IWISQEDNSKDLEEFLFKFVVAMGSARTGILGEATINMASYMSSSASVSVSLPLKKCNHG 130

Query: 627  TILQVAIQCLTPQANLR---WRDTNSLTEDVNSDYSDLDNMSDAPYGKNIKNVGSSMSNS 797
            TILQV I CLTP+   R    +DTNS  ED   D  D D   D       KN GSS S  
Sbjct: 131  TILQVKIHCLTPRIKQRDEESKDTNSHEEDPKVDNHDTDIKLDGS-DNAAKNGGSSSSKD 189

Query: 798  ILDTSHARGLGSRETSLSTGRSHHSFYSMDDSF--GRESSRSNLSEVAIDLIGRPEXXXX 971
            +  TSH   LGSRETS ST  S+HSF S       G  SS +N++       GR +    
Sbjct: 190  LEPTSHPGELGSRETSFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSS 249

Query: 972  XXXXXXXXXNVYDSPRSNRSPFS---LSSGKNIINRRHD-SEKVSHTVPASPLRTFDSSD 1139
                        D P+S  S F+   + SG    N   D +   S+ + +S L    SS 
Sbjct: 250  QTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSK 309

Query: 1140 FVLEAEGATPEELRAEARTWERKARKLVVDFDLSRKETSDQTKNLENVSMELFGLQTECE 1319
             +LEA   T EELRAEA+ WER ++KL++D ++ RKE SDQ+KN   + MEL    +E +
Sbjct: 310  NLLEAAEDTIEELRAEAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERD 369

Query: 1320 GLKHENKHLKNILGESAVK 1376
             LK E   LK +L ES +K
Sbjct: 370  ALKKEIDQLKILLEESKMK 388


>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1362

 Score =  291 bits (746), Expect = 2e-76
 Identities = 169/369 (45%), Positives = 238/369 (64%), Gaps = 5/369 (1%)
 Frame = +3

Query: 312  LQVPTGWDKLSISLISVETDKTVSKTGKATVYNGNCRWTETLSESIWVSPDDASKELQQC 491
            +QVP GWDKL +S++S ET KT++K+GKA+V N +C+WTETLSESIW+S  D+SK++  C
Sbjct: 1    MQVPKGWDKLYVSIVSTETGKTLTKSGKASVRNASCQWTETLSESIWISRHDSSKQIGDC 60

Query: 492  LYKLLISKASTRSGILGEVTVNLSSYLSSETSLPVALPLKKCNHGTILQVAIQCLTPQAN 671
             +KL++S  S RS ILGE TVNL+SY +S+T++PV+L LKKCNHGTILQV+ Q       
Sbjct: 61   FFKLVVSMGSARSSILGEATVNLASYKNSKTAVPVSLSLKKCNHGTILQVSHQ------- 113

Query: 672  LRWRDTNSLTEDVNSDYSDLDNMSDAPYGKNIKNVGSSMSNSILDTSHARGLGSRETSLS 851
                 +NS  EDVN D  D+++ SD       K++GSS S+ +  +SHA  L +R+ S S
Sbjct: 114  -----SNSHMEDVNVDCDDVESKSDVSDNSLTKSIGSSSSSHLDSSSHAGELLNRDFSFS 168

Query: 852  TGRSHHSFYSMDDSFGRE--SSRSNLSEVAIDLIGRPEXXXXXXXXXXXXXNVYDSPRSN 1025
               S +SF S D S GRE  S  +NL+ +  + IGR +             +  DS RSN
Sbjct: 169  ASGSRYSFDSTDGSLGRETYSPLNNLTGIMNNQIGR-QDSTGSQNSSHGSYSFNDSSRSN 227

Query: 1026 RSPFS---LSSGKNIINRRHDSEKVSHTVPASPLRTFDSSDFVLEAEGATPEELRAEART 1196
            +S F+   L+S  ++  +R +  +VS +V +SPLR   SS  +LEA  A  EELRAEAR 
Sbjct: 228  QSSFNSKVLASRSSLQIQRDEFNQVSRSVASSPLRNAGSSKDLLEAAEAKIEELRAEARM 287

Query: 1197 WERKARKLVVDFDLSRKETSDQTKNLENVSMELFGLQTECEGLKHENKHLKNILGESAVK 1376
            WE+ ARKL+ D +  RKE SDQ+K   ++ MEL   + EC+GLK E + +K +L ES VK
Sbjct: 288  WEQNARKLMNDLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLVK 347

Query: 1377 VRDADNLKV 1403
             + A+N+++
Sbjct: 348  QKSAENMEL 356


>emb|CBI31378.3| unnamed protein product [Vitis vinifera]
          Length = 1338

 Score =  288 bits (736), Expect = 3e-75
 Identities = 178/399 (44%), Positives = 232/399 (58%), Gaps = 3/399 (0%)
 Frame = +3

Query: 216  MNRFHKHNXXXXXXVDFKSGERLDFKFSSLQALQVPTGWDKLSISLISVETDKTVSKTGK 395
            M R H+H          KSG R  F FS  QALQVP GWDKL +S+ISVET +T +KTGK
Sbjct: 1    MFRLHRHKPD-------KSGHRFHFNFSGFQALQVPKGWDKLCVSIISVETGRTTTKTGK 53

Query: 396  ATVYNGNCRWTETLSESIWVSPDDASKELQQCLYKLLISKASTRSGILGEVTVNLSSYLS 575
            ++V  GNCRWTETLS+SIW+  DDASKE+++CL+KL+++  S+RSGILGE TVNL+ Y+S
Sbjct: 54   SSVRTGNCRWTETLSDSIWIPQDDASKEVEECLFKLVVAMGSSRSGILGEATVNLAGYVS 113

Query: 576  SETSLPVALPLKKCNHGTILQVAIQCLTPQANLRWRDTNSLTEDVNSDYSDLDNMSDAPY 755
            S+ S  ++LPL+KC+HGT LQV IQCLTP+  LR   T  +   V+S         D P 
Sbjct: 114  SKASFLLSLPLEKCHHGTTLQVKIQCLTPRTTLR---TYQMCLTVHS-----PGALDLPL 165

Query: 756  GKNIKNVGSSMSNSILDTSHARGLGSRETSLSTGRSHHSFYSMDDSFGRESSRSNLSEVA 935
               + N+   +    LDTS            S   SH SF SM+DS    SS    S  A
Sbjct: 166  ---VTNLTVHIIQEKLDTSR-----------SASGSHRSFDSMEDSTSSNSSSLFGSYPA 211

Query: 936  IDLIGRPEXXXXXXXXXXXXXNVYDSPRSNRSPFS---LSSGKNIINRRHDSEKVSHTVP 1106
             D+                        RSNRS F+    SSG ++ N+R D  +VSH + 
Sbjct: 212  NDI-----------------------SRSNRSSFNSKVSSSGSHLQNQRDDFGRVSHAIA 248

Query: 1107 ASPLRTFDSSDFVLEAEGATPEELRAEARTWERKARKLVVDFDLSRKETSDQTKNLENVS 1286
             SPLR   S   +  AEGA  EELRAEAR WE+ ARKL+ D ++ RKE S+Q+KN  ++ 
Sbjct: 249  TSPLRNAGSCKDLEAAEGAF-EELRAEARMWEQNARKLMHDLEILRKEFSNQSKNQADLD 307

Query: 1287 MELFGLQTECEGLKHENKHLKNILGESAVKVRDADNLKV 1403
            MEL    TEC  L+ E + L  +L E  V+ +D +NLK+
Sbjct: 308  MELAASHTECNRLRQEIEQLNFLLEELTVRQKDTENLKL 346


Top