BLASTX nr result

ID: Atractylodes22_contig00022608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022608
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
emb|CBI15328.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...    61   1e-07

>ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|222844657|gb|EEE82204.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/52 (67%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -2

Query: 250 YKLDPRFMKKPTAVK-EKKRETLPEKMAXXXXXXXXXXLSFVKKPKKAQRRA 98
           Y++DP+FMKKP AVK EKKRETLPEKMA          LSFVKKPKK  RRA
Sbjct: 464 YRVDPKFMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRA 515


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Vitis vinifera]
          Length = 516

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 250 YKLDPRFMKKPT-AVKEKKRETLPEKMAXXXXXXXXXXLSFVKKPKKAQR 104
           YKLDPRF+KKPT A KEKKRETLPEKMA          LSFVKKPK+ +R
Sbjct: 465 YKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRR 514


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 250 YKLDPRFMKKPT-AVKEKKRETLPEKMAXXXXXXXXXXLSFVKKPKKAQR 104
           YKLDPRF+KKPT A KEKKRETLPEKMA          LSFVKKPK+ +R
Sbjct: 481 YKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRR 530


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -2

Query: 250 YKLDPRFMKKPTAVK-EKKRETLPEKMAXXXXXXXXXXLSFVKKPKKAQRRAY 95
           YK+D ++MKKP AVK EKKRETLPEKMA          LSFVKKPKK  RR +
Sbjct: 517 YKVDEKYMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMRRPF 569


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