BLASTX nr result

ID: Atractylodes22_contig00022599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022599
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516875.1| zinc finger protein, putative [Ricinus commu...   206   2e-51
ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
gb|AFK36462.1| unknown [Lotus japonicus]                              203   1e-50
ref|XP_003546095.1| PREDICTED: RING finger and CHY zinc finger d...   203   1e-50
ref|NP_197366.1| ring finger and CHY zinc finger domain-containi...   201   5e-50

>ref|XP_002516875.1| zinc finger protein, putative [Ricinus communis]
           gi|223543963|gb|EEF45489.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 269

 Score =  206 bits (524), Expect = 2e-51
 Identities = 89/125 (71%), Positives = 98/125 (78%)
 Frame = -2

Query: 571 FHCDDCGICRIGGRENFFHCEKCGSCYSIELLDNHSCVENSMRHHCPICYEYLFDSMKDT 392
           FHCDDCGICR+GGREN+FHC KCGSCY+I LL NHSCVENSMRHHCPICYEYLFDS+KDT
Sbjct: 110 FHCDDCGICRVGGRENYFHCSKCGSCYAISLLGNHSCVENSMRHHCPICYEYLFDSLKDT 169

Query: 391 AVMKCGHTMHRECYNEMIXXXXXXXXXXXXXXXXXXXKRDTFCCPICSKSIMDMSATWKM 212
            VMKCGHTMH ECYNEMI                   +RD +CCPICSKS++DMS TWK 
Sbjct: 170 TVMKCGHTMHFECYNEMI-------------------ERDKYCCPICSKSVIDMSKTWKR 210

Query: 211 IDEEV 197
           IDEE+
Sbjct: 211 IDEEI 215


>ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|222852578|gb|EEE90125.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  204 bits (520), Expect = 6e-51
 Identities = 88/125 (70%), Positives = 99/125 (79%)
 Frame = -2

Query: 571 FHCDDCGICRIGGRENFFHCEKCGSCYSIELLDNHSCVENSMRHHCPICYEYLFDSMKDT 392
           FHCDDCGICR+GGREN+FHC+KCGSCY+  LLDNHSCVENSMRHHCPICYEYLFDS+K+T
Sbjct: 110 FHCDDCGICRVGGRENYFHCKKCGSCYATSLLDNHSCVENSMRHHCPICYEYLFDSLKET 169

Query: 391 AVMKCGHTMHRECYNEMIXXXXXXXXXXXXXXXXXXXKRDTFCCPICSKSIMDMSATWKM 212
            VMKCGHTMH ECY+EMI                   KRD +CCPICSKSI+DMS TW+ 
Sbjct: 170 TVMKCGHTMHGECYDEMI-------------------KRDKYCCPICSKSIIDMSKTWER 210

Query: 211 IDEEV 197
           IDEE+
Sbjct: 211 IDEEI 215


>gb|AFK36462.1| unknown [Lotus japonicus]
          Length = 267

 Score =  203 bits (517), Expect = 1e-50
 Identities = 89/125 (71%), Positives = 96/125 (76%)
 Frame = -2

Query: 571 FHCDDCGICRIGGRENFFHCEKCGSCYSIELLDNHSCVENSMRHHCPICYEYLFDSMKDT 392
           FHCDDCGICR+GGRENFFHC+KCGSCYS+ L DNH CVENSMRHHCPICYEYLFDS+KDT
Sbjct: 108 FHCDDCGICRVGGRENFFHCKKCGSCYSVGLRDNHICVENSMRHHCPICYEYLFDSLKDT 167

Query: 391 AVMKCGHTMHRECYNEMIXXXXXXXXXXXXXXXXXXXKRDTFCCPICSKSIMDMSATWKM 212
           AVMKCGHTMH ECY+EMI                   KRD +CCPICSKSI DMS  WK 
Sbjct: 168 AVMKCGHTMHSECYHEMI-------------------KRDNYCCPICSKSIADMSMMWKR 208

Query: 211 IDEEV 197
            DEE+
Sbjct: 209 TDEEI 213


>ref|XP_003546095.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Glycine max]
          Length = 267

 Score =  203 bits (517), Expect = 1e-50
 Identities = 89/125 (71%), Positives = 95/125 (76%)
 Frame = -2

Query: 571 FHCDDCGICRIGGRENFFHCEKCGSCYSIELLDNHSCVENSMRHHCPICYEYLFDSMKDT 392
           FHCDDCGICRIGGREN+FHC KCGSCYS  L DNH CVENSMRHHCPICYEYLFDS+KDT
Sbjct: 108 FHCDDCGICRIGGRENYFHCNKCGSCYSTSLRDNHMCVENSMRHHCPICYEYLFDSLKDT 167

Query: 391 AVMKCGHTMHRECYNEMIXXXXXXXXXXXXXXXXXXXKRDTFCCPICSKSIMDMSATWKM 212
           AVMKCGHTMH ECY EM+                   KRD +CCPICSKS+MDMS  WK 
Sbjct: 168 AVMKCGHTMHSECYLEML-------------------KRDKYCCPICSKSVMDMSRAWKR 208

Query: 211 IDEEV 197
           IDEE+
Sbjct: 209 IDEEI 213


>ref|NP_197366.1| ring finger and CHY zinc finger domain-containing protein 1
           [Arabidopsis thaliana] gi|17381208|gb|AAL36416.1|
           unknown protein [Arabidopsis thaliana]
           gi|20465813|gb|AAM20011.1| unknown protein [Arabidopsis
           thaliana] gi|332005211|gb|AED92594.1| ring finger and
           CHY zinc finger domain-containing protein 1 [Arabidopsis
           thaliana]
          Length = 267

 Score =  201 bits (512), Expect = 5e-50
 Identities = 86/125 (68%), Positives = 98/125 (78%)
 Frame = -2

Query: 571 FHCDDCGICRIGGRENFFHCEKCGSCYSIELLDNHSCVENSMRHHCPICYEYLFDSMKDT 392
           FHCDDCGICR+GGRENFFHC+KCGSCY++ L +NH CVENSMRHHCPICYEYLFDS+KDT
Sbjct: 108 FHCDDCGICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDT 167

Query: 391 AVMKCGHTMHRECYNEMIXXXXXXXXXXXXXXXXXXXKRDTFCCPICSKSIMDMSATWKM 212
            VMKCGHTMH ECYNEMI                   KRD FCCPICS+S++DMS TW+ 
Sbjct: 168 NVMKCGHTMHVECYNEMI-------------------KRDKFCCPICSRSVIDMSKTWQR 208

Query: 211 IDEEV 197
           +DEE+
Sbjct: 209 LDEEI 213


Top