BLASTX nr result

ID: Atractylodes22_contig00022533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022533
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   122   4e-26
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   119   3e-25
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   115   3e-24
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   111   5e-23

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  122 bits (305), Expect = 4e-26
 Identities = 69/140 (49%), Positives = 95/140 (67%), Gaps = 23/140 (16%)
 Frame = -1

Query: 446  LVADKQLQKELIYDIQKYESLKAKSTAAEAVGGK-----------------------GVN 336
            LVADKQLQKELIYDIQKYE+ KAK+T AEAVG K                       G +
Sbjct: 1186 LVADKQLQKELIYDIQKYEAAKAKATVAEAVGTKPKSGSNQLADVSKNLTKTQEQTVGQS 1245

Query: 335  AQKLHTNSKVSSAVAGALAEATAKSVLRDVNQGAGTPLLSAMNVPKLKSSTGGVARHKGR 156
            + +L ++S+V+SA+A   A ATA+SVLR++N+G GTP LS+++VPK+KS T G+   K +
Sbjct: 1246 SNELPSDSRVASAIADTAAAATARSVLREINKGTGTPPLSSLSVPKVKSCT-GMCNSKDK 1304

Query: 155  SAAVLESLRRRQTFDLDDES 96
               V++SLR+RQ+FD D+E+
Sbjct: 1305 CMDVIQSLRKRQSFDSDEEN 1324


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/140 (47%), Positives = 95/140 (67%), Gaps = 23/140 (16%)
 Frame = -1

Query: 446  LVADKQLQKELIYDIQKYESLKAKSTAAEAVGGK-----------------------GVN 336
            LVADKQLQKELIYDI+KYE+ KAK+T AEAVG K                       G +
Sbjct: 1196 LVADKQLQKELIYDIKKYEAAKAKATVAEAVGTKPKSVSNQSPDASKNLTKTQGQTVGQS 1255

Query: 335  AQKLHTNSKVSSAVAGALAEATAKSVLRDVNQGAGTPLLSAMNVPKLKSSTGGVARHKGR 156
            + +L ++S+V+SA+A A A ATA+SVLR++N+G  TP LS+++VPK+KS T G+   K +
Sbjct: 1256 SNELPSDSRVASAMANAAAAATARSVLREINKGTATPSLSSLSVPKVKSCT-GMCHSKDK 1314

Query: 155  SAAVLESLRRRQTFDLDDES 96
               V++S+R+RQ+FD D+E+
Sbjct: 1315 RMDVIQSIRKRQSFDSDEEN 1334


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  115 bits (289), Expect = 3e-24
 Identities = 69/139 (49%), Positives = 89/139 (64%), Gaps = 22/139 (15%)
 Frame = -1

Query: 446  LVADKQLQKELIYDIQKYESLKAKSTAAEAVG----------------------GKGVNA 333
            LVADKQLQKELIYD+QKYES +AK TAA+AV                       G+    
Sbjct: 1175 LVADKQLQKELIYDMQKYESNEAKITAAQAVATMQKPSSFLSPGVPKTANRTAQGQNKFP 1234

Query: 332  QKLHTNSKVSSAVAGALAEATAKSVLRDVNQGAGTPLLSAMNVPKLKSSTGGVARHKGRS 153
              LH +++V+SA+A A A A A+SVL++VN+G+ TP LSA++VPKLKS+ G       R 
Sbjct: 1235 DNLHNDARVASAMADATAAARARSVLKEVNKGSLTPPLSAISVPKLKSNQGASGAQNDRP 1294

Query: 152  AAVLESLRRRQTFDLDDES 96
              VLESLRRRQ+F+ DDE+
Sbjct: 1295 LDVLESLRRRQSFNSDDEN 1313


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  114 bits (285), Expect = 8e-24
 Identities = 65/118 (55%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -1

Query: 446  LVADKQLQKELIYDIQKYESLKAKSTAAEAVGGKGVNAQKLHTNSKVSSAVAGALAEATA 267
            LVADKQLQKELIYD++KY++ KAKSTAA AV       +  H  SKV+SA++ A+A AT 
Sbjct: 1177 LVADKQLQKELIYDMEKYDAAKAKSTAAAAVATMQPCYRSPHV-SKVASAMSDAVAAATV 1235

Query: 266  KSVLRDVNQGAGTPLLSAMNVPKLKSSTGGVARHKG-RSAAVLESLRRRQTFDLDDES 96
            +SVL++VN+G+ TP  S++  PKLKSS GG    +G R   V+ESLRRRQ+F+ D+E+
Sbjct: 1236 RSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSSRGDRPLDVIESLRRRQSFNSDEEN 1293


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/127 (50%), Positives = 88/127 (69%), Gaps = 10/127 (7%)
 Frame = -1

Query: 446  LVADKQLQKELIYDIQKYESLKAKSTAAEAVGGK---------GVNAQKLHTNSKVSSAV 294
            LVADKQLQKELIYD++KY++ KAKSTAA AV                ++L   S+V+SA+
Sbjct: 1218 LVADKQLQKELIYDMEKYDAAKAKSTAAAAVATMQPCYRSPHVSKFTERLPVQSRVASAM 1277

Query: 293  AGALAEATAKSVLRDVNQGAGTPLLSAMNVPKLKSSTGGVARHKG-RSAAVLESLRRRQT 117
            + A+A AT +SVL++VN+G+ TP  S++  PKLKSS GG    +G R   V+ESLRRRQ+
Sbjct: 1278 SDAVAAATVRSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSSRGDRPLDVIESLRRRQS 1337

Query: 116  FDLDDES 96
            F+ D+E+
Sbjct: 1338 FNSDEEN 1344


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