BLASTX nr result
ID: Atractylodes22_contig00022530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00022530
(633 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp... 177 7e-54
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 168 5e-48
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 160 3e-45
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 141 1e-39
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] 167 1e-39
>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 177 bits (449), Expect(2) = 7e-54
Identities = 88/172 (51%), Positives = 110/172 (63%), Gaps = 5/172 (2%)
Frame = -2
Query: 632 HTTLPTPCRPLHLHNVLVTPHIIKNLISVKQFTKDNKCSIEFDEFGFSIKDRRTHQTLLR 453
H TL P R L NVLV P I+KNL+SV++F DN C+IEFD FGFS+KD +T LLR
Sbjct: 406 HGTLSYPSRSFSLRNVLVCPAIVKNLVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLR 465
Query: 452 CDSSGDLYPATPSK-----RTPLAFVSSALLWHQRLGHPGGRVLQSLISRNFIACNNRLT 288
CDSSG LY TPS A S + +WH+RLGHP +L L+S I+
Sbjct: 466 CDSSGPLYSVTPSSYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHLLSSLSISVPKTDL 525
Query: 287 STNCQACQLGKHVRLPFTISEFVVNSSFELVHFDVWTLPIRSTSGISYYVIF 132
++ CQACQLGKH RLPF S + +S FE+VH D+WT P+ S SG+ YY+IF
Sbjct: 526 TSLCQACQLGKHTRLPFFNSNTIASSLFEIVHSDIWTSPVPSISGLKYYLIF 577
Score = 59.3 bits (142), Expect(2) = 7e-54
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -1
Query: 135 FLDHFSHFLWVYPLRKKSDVFAKFLHFRSSINKQFN*EIKAFQCD 1
FLD +SHF+W YPL +KSD K+++F + + QFN + K+ QCD
Sbjct: 577 FLDQYSHFVWAYPLHRKSDTLVKYINFSTYVQTQFNRQFKSLQCD 621
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 168 bits (425), Expect(2) = 5e-48
Identities = 80/166 (48%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Frame = -2
Query: 623 LPTPCRPLHLHNVLVTPHIIKNLISVKQFTKDNKCSIEFDEFGFSIKDRRTHQTLLRCDS 444
LP L N+LV P +++NL+S++QFT+DN CSIEFDEFGFS+K RT + +LRC+S
Sbjct: 405 LPIGTTKFDLKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNS 464
Query: 443 SGDLYP---ATPSKRTPLAFVSSALLWHQRLGHPGGRVLQSLISRNFIACNNRLTSTNCQ 273
GDLY A P+ S+ LWH+RLGHP +Q+L + C ++ + C
Sbjct: 465 RGDLYTLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKLAILPC-TKIDHSLCH 523
Query: 272 ACQLGKHVRLPFTISEFVVNSSFELVHFDVWTLPIRSTSGISYYVI 135
AC+LGKH RLPF+ S+ +S FELVH DVWT P+ STSG YY++
Sbjct: 524 ACKLGKHTRLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLV 569
Score = 48.9 bits (115), Expect(2) = 5e-48
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -1
Query: 132 LDHFSHFLWVYPLRKKSDVFAKFLHFRSSINKQFN*EIKAFQCD 1
LD FSHF W +PLR KSDV + F + + QF IK FQ D
Sbjct: 571 LDDFSHFCWTFPLRHKSDVHQHIVEFVAYVTTQFGSSIKCFQAD 614
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 160 bits (404), Expect(2) = 3e-45
Identities = 83/169 (49%), Positives = 108/169 (63%), Gaps = 6/169 (3%)
Frame = -2
Query: 623 LPTPCRPLHLHNVLVTPHIIKNLISVKQFTKDNKCSIEFDEFGFSIKDRRTHQTLLRCDS 444
LP L N+LV P +++NL+ V+QFT+DNKCS EFDEFGFS+KD T + +LRC+S
Sbjct: 404 LPIGTTRFALKNILVAPSLVRNLLFVRQFTRDNKCSFEFDEFGFSVKDLPTRRVILRCNS 463
Query: 443 SGDLY--PATPSKRTPLAFVS-SALLWHQRLGHPGGRVLQSLISRNFIAC---NNRLTST 282
GDLY P T T +F++ S+ LWH RLGHP +Q+L ++C NN+L
Sbjct: 464 RGDLYTLPTTVPAITAHSFLAKSSTLWHHRLGHPSPAAVQTLHKLAILSCTRSNNKL--- 520
Query: 281 NCQACQLGKHVRLPFTISEFVVNSSFELVHFDVWTLPIRSTSGISYYVI 135
C AC LGKH RL F+ S +S FELVH DVWT P+ S SG YY++
Sbjct: 521 -CHACHLGKHTRLSFSKSSSSTSSPFELVHCDVWTSPVLSLSGFKYYLV 568
Score = 47.8 bits (112), Expect(2) = 3e-45
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1
Query: 132 LDHFSHFLWVYPLRKKSDVFAKFLHFRSSINKQFN*EIKAFQCD 1
LD F+HF W +PLR KSDV L F + + QF+ I+ FQ D
Sbjct: 570 LDDFTHFCWTFPLRHKSDVHQHLLEFVAYVKTQFSLPIRCFQAD 613
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 141 bits (356), Expect(2) = 1e-39
Identities = 77/172 (44%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Frame = -2
Query: 632 HTTLPTPCRPLHLHNVLVTPHIIKNLISVKQFTKDNKCSIEFDEFGFSIKDRRTHQTLLR 453
H+ + P L ++L +P IIKNLISV++F DN CS+EFD FGFS+KD RT + R
Sbjct: 606 HSKICHPNCSFTLRDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVIAR 665
Query: 452 CDSSGDLY------PATPSKRTPLAFVSSALLWHQRLGHPGGRVLQSLISRNFIACNNRL 291
+SSG LY P P+ LA S+ LLWH+RLGH G L L + +
Sbjct: 666 FNSSGPLYSLHHALPPPPAATALLANSSTDLLWHRRLGHLGHDALNRLAA--VVPMTRGD 723
Query: 290 TSTNCQACQLGKHVRLPFTISEFVVNSSFELVHFDVWTLPIRSTSGISYYVI 135
+ C ACQLG+HVRLPF S +++FEL H D+WT P+ S SG YY++
Sbjct: 724 LTGVCHACQLGRHVRLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLV 775
Score = 47.8 bits (112), Expect(2) = 1e-39
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = -1
Query: 132 LDHFSHFLWVYPLRKKSDVFAKFLHFRSSINKQFN*EIKAFQCD 1
LD SH++W +PLR KSD F HF + + QF I++ QCD
Sbjct: 777 LDDCSHYVWTFPLRFKSDTFTTLSHFFAYVKTQFATNIRSIQCD 820
>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
Length = 826
Score = 167 bits (424), Expect = 1e-39
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = -2
Query: 614 PCRPLHLHNVLVTPHIIKNLISVKQFTKDNKCSIEFDEFGFSIKDRRTHQTLLRCDSSGD 435
P R L L+ VLV+PHIIKNLIS+++FT DN C IEFD FG S+KD +T + RC+SSGD
Sbjct: 514 PHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVIARCNSSGD 573
Query: 434 LYPATPSKRTPLAFVSS-ALLWHQRLGHPGGRVLQSLISRNFIACNNRLTSTNCQACQLG 258
LYP P + A +++ A LWH+RLGH G L L+S + I+CN C ACQLG
Sbjct: 574 LYPFFPPATSATALLAAPASLWHRRLGHLGREALSQLVSSSAISCNKDDDYHLCHACQLG 633
Query: 257 KHVRLPFTISEFVVNSSFELVHFDVWTLPIRSTSGISYYVI 135
+H RLPF+ S ++F+L+H D+W PI S SG YY+I
Sbjct: 634 RHTRLPFSTSTSRATNNFDLIHCDLWASPIVSVSGYKYYLI 674